Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g01238 ATGGCTTTGTTGCTGCATTCTCCCTTTCTCCCCTCTCTCTCTCTCCGCTCACATCTCCACCCGAACCCTAACCCTAACTCTGCTCCCCATCGTTTCTTCCTATTCGTTATTCCCGTCACTTTTAATGCCGCTTTCCGATTCTCCGCTCACCATCGTCTGCTTCCATCGCCCTCCCCTGCCATCCCCTGCCGTCATTCCTTACTAACAACCCCTCTTCAGCTGCCGGGGGCTGCTCTGCGCCTCGCCGTTTCGGTGCTGCTGTTTCTCTGCTTCAGCTTCTGCCTCGGCGGCGTTCGAGCTTGTTCGGCATCTATGCCCTCTGTTGCCACCGCTGCTTCCTCCGTTAACGAGGATCAAACGGTTCAAGATGATGGCGATGAAAGAAAACAGGGTAATGAAGAAAATCTGGAACTAGAAGCAGCTTTTAATACTTGGAAATCCAAAACATTTGCATTGACTGTTCCTTTGAAAGTTGTTGCTCTACGCGGTTCTCTGCCTCCTTCGTGGATCAAGGACTTCATAAATTCTCAAGGAAAGAGATTAAAGTTTAATGTGAAGTATCATGCCAGTCTTGATGGTATCTTTTCTGAGCTATCAATTCCTTTTACTAAAGGAAATCTCGGGCCTGCCTCTGCTTTGGCAGCAGATATTGTTGGAATTGGTGATTCATGGCTTAAAGTTGCCATTAAAAAAGCTATAATTGAGCCAATAAGGGATGTAGAAGATCAGGATTGGTTTAAAGGCTTAGATGAGAAATGGAAGGTATATCTACGCAGGAACTGTGAGGGAGAAATGGATCCTAAAGGTGACATATGGGCGGCTCCGTATAGATGGGGCTGCATGGTAATAGCATACAAGACAAATAAATTTCAAAAGCATAAGTTGGCTCCTATAGAGGATTGGGAAGATCTGTGGCGGCCTGATCTTGCAGGGAAAATTGCAATGGTTGATTCTCCTAGAGAAGTTGTTGGTGCAGTTTTGAAGTATATGGGGGCTTCCTACAATGCAAAGAATATCAACTTGGAAGTCAATGGTGGGAGAGATGCTGTCAAGCTCAATTTGGCATTGCTTGCAAAACAGGTCCGATTGTTTGATAGTGTAAACTACCTAAAAGCTTTTGGAGTTGGAGACGTGTGGGTAGCTGTTGGATGGAGTAGTGATGTTATCCCTGTTGCTAAGCGCATGTCTAATGTTGCAGTTATTGTTCCAAAGTCTGGAGCAAGTTTATGGGCGGATCTCTGGGTATGTCTCTTTTATGCGTTGTCTCCAATATCTTTTTAA 1281 0.4536 MALLLHSPFLPSLSLRSHLHPNPNPNSAPHRFFLFVIPVTFNAAFRFSAHHRLLPSPSPAIPCRHSLLTTPLQLPGAALRLAVSVLLFLCFSFCLGGVRACSASMPSVATAASSVNEDQTVQDDGDERKQGNEENLELEAAFNTWKSKTFALTVPLKVVALRGSLPPSWIKDFINSQGKRLKFNVKYHASLDGIFSELSIPFTKGNLGPASALAADIVGIGDSWLKVAIKKAIIEPIRDVEDQDWFKGLDEKWKVYLRRNCEGEMDPKGDIWAAPYRWGCMVIAYKTNKFQKHKLAPIEDWEDLWRPDLAGKIAMVDSPREVVGAVLKYMGASYNAKNINLEVNGGRDAVKLNLALLAKQVRLFDSVNYLKAFGVGDVWVAVGWSSDVIPVAKRMSNVAVIVPKSGASLWADLWVCLFYALSPISF 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g01238 426 Pfam Bacterial extracellular solute-binding protein 215 415 - -
Arst1g01238 426 Gene3D - 279 422 - -
Arst1g01238 426 PANTHER SPERMIDINE/PUTRESCINE-BINDING PERIPLASMIC PROTEIN 82 415 - -
Arst1g01238 426 PRINTS Bacterial periplasmic spermidine/putrescine-binding protein signature 270 286 IPR001188 GO:0015846|GO:0019808|GO:0042597
Arst1g01238 426 PRINTS Bacterial periplasmic spermidine/putrescine-binding protein signature 403 422 IPR001188 GO:0015846|GO:0019808|GO:0042597
Arst1g01238 426 PRINTS Bacterial periplasmic spermidine/putrescine-binding protein signature 299 313 IPR001188 GO:0015846|GO:0019808|GO:0042597
Arst1g01238 426 PRINTS Bacterial periplasmic spermidine/putrescine-binding protein signature 317 336 IPR001188 GO:0015846|GO:0019808|GO:0042597
Arst1g01238 426 SUPERFAMILY Periplasmic binding protein-like II 156 417 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g01238 - - aip:107622406 798.119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g01238 1 12310930 12313877 Arst1g01238 1 12310930 12313877 ECH