Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g01237 ATGGGCGGCAGCAGCAGAGTTCAAAATGCAGTAGTTGTTGTAACGGCGGTGTTGGTGGTGTTGGGAATGAATGTTGATGGGTTCAGCACGGAACTGATTCCCCGGCATTCTCCCGCGTCCCCGTTTTACAACCCATCAAGAAGCCAGTACGAGCATTTGCAGGATGCAATCGAGCGATCACGGAAGCGAGTGAACCATTTCGAGAACAAACTAGAGGCCCCGCTGAGTCCGGGCGGTATAGAGTATCTGATGCGGATATCCATTGGAACTCCGCCGGTGGAGTTTGTGGCAATAGCAGACACTGGGAGTGATCTAACATGGACTCAGTGCCTGCCATGCACACAATGCTACAAGCAAAACTTCCCCATCTACGATCCCCGCCGTTCGTCCTCTTACAAGACCATCTCATGCAAGGCTGACGTGTGTTTCGATCTACAATCCATAAGCTCAGGCTGTGACCGAAACAACAGCACATGTGAGTATCTTTATGGATATGCCGACAATTCCCGGACCCAGGGAACGCTATCCACTGAAAGTATTACCATCGGCGGAACAGTGATTCGCAACAATATATTCGGATGTTCACATCTAAGCACGGGGACTTTTCCGAGCACAGCGAGCGGCATCATAGGGCTTGGTGCTGGCAAACTTTCCTTGGTTTCTCAGTTAGGTGAGTCTGGGAGAAAATTCTCCTATTGTCTAGCACCATATTCTTCTAAATCCACCACCAGGATAAGCTTCGGTTCCGATGCCCTTCTTTCTGGTGTCTCAACTCCTATTCAGAGTGATCCTGCCTTCGACGCCTTCTACTTTCTCTCTCTTGAATCCCTCAGCGTTGGCAGCAAGACAATCCCACTCCCGTCATCAAACGGTGTAATTCGAGGAGGAGGGGGGAATATCGTCATTGATTCTGGCACAACGGTCACATTCCTACCACAAGAGACACTTCTTCGATTGGTTTCGGCTTTGGAAGAAGCCATAAGGGTTCCCAAGACGACTGACCCTACCAGTACATTCAGCCTTTGTTACAGGGTTGAGGGGGAGAGTGAATTTCCGAATGTGACTGCAGATTTCAAGGGGGCTCGAGTGGTGCTACGCCCAGTGAATACCTTCGTAGAGGTTGCAGATGGTGTGGTGTGCTTGGCAGTTTTGCCAACACAACGAGTATCTGTTTTTGGGAACATTGCTCAGACCAACTTCTTAGTGGGATATGATCTAGATGCTCGCGCTGTCACTTTTAAGCCTACCGATTGTACCAAAGCCAATTAA 1269 0.4957 MGGSSRVQNAVVVVTAVLVVLGMNVDGFSTELIPRHSPASPFYNPSRSQYEHLQDAIERSRKRVNHFENKLEAPLSPGGIEYLMRISIGTPPVEFVAIADTGSDLTWTQCLPCTQCYKQNFPIYDPRRSSSYKTISCKADVCFDLQSISSGCDRNNSTCEYLYGYADNSRTQGTLSTESITIGGTVIRNNIFGCSHLSTGTFPSTASGIIGLGAGKLSLVSQLGESGRKFSYCLAPYSSKSTTRISFGSDALLSGVSTPIQSDPAFDAFYFLSLESLSVGSKTIPLPSSNGVIRGGGGNIVIDSGTTVTFLPQETLLRLVSALEEAIRVPKTTDPTSTFSLCYRVEGESEFPNVTADFKGARVVLRPVNTFVEVADGVVCLAVLPTQRVSVFGNIAQTNFLVGYDLDARAVTFKPTDCTKAN 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g01237 422 CDD pepsin_A_like_plant 81 418 IPR034161 -
Arst1g01237 422 FunFam Aspartic proteinase CDR1 252 421 - -
Arst1g01237 422 SUPERFAMILY Acid proteases 77 418 IPR021109 -
Arst1g01237 422 FunFam Probable aspartic protease At2g35615 61 248 - -
Arst1g01237 422 Gene3D Acid Proteases 61 249 IPR021109 -
Arst1g01237 422 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 300 311 IPR001969 GO:0004190|GO:0006508
Arst1g01237 422 Pfam Xylanase inhibitor C-terminal 270 414 IPR032799 -
Arst1g01237 422 Gene3D Acid Proteases 250 420 IPR021109 -
Arst1g01237 422 ProSiteProfiles Peptidase family A1 domain profile. 82 414 IPR033121 -
Arst1g01237 422 Pfam Xylanase inhibitor N-terminal 82 249 IPR032861 -
Arst1g01237 422 PANTHER OS07G0603500 PROTEIN-RELATED 30 419 - -
Arst1g01237 422 Coils Coil 50 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g01237 Arst-Chr1 12279615 12280883 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g01237 82 420 Miscellaneous Gene Families AT1G44130 26.810 6.19e-23 98.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g01237 - - ahf:112783401 740.725
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g01237 1 12279615 12280883 Arst1g01237 1 12279615 12280883 ECH