Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g01231 ATGTTAGTGATGAGGAAAAGACTAGCTTGCTGCACCAGGACATCCAAAATTAGCACTGACTTTGATCATGACCACCAAGCCAGGATTATGACATATGATGGCCTTGAGAGTTGCATTCTTGACAACCAATCTTCTGAAGATGAAAGCAGAACTAGCAGAGGAGATGGATGTATAACCGATTCATTCAATGACGAATGGGAACTCTCTCAGAGTCCTCAACATTTTTATGTCAAAGAGAAGCCTGCTTATGCTATGCAGTGTTCGGATGTGGAAGCCATGAGAGAAAAGTTCTCAAAGTTGCTGCTAGGTGATGATATTACAGGAGGAACTAAGGGCCTCAATACAGCTTTAGCTTTGTCTAATGCCATCTCTAGCCTATCAGTGACGGTGTTTGGCGAGTTGTGGAAATTGGAACCGTTACCTGAAGAACGGAAGAGCAAATGGCAAAGAGAAATGGACTGGTTGCTGTCTCCTACAAACTATATGGTTGAGTTGGTTCCTGCAAAGCAAAATGCTGCCAATGGTGGAATCTTTGAGATAATGACCCCGAAAGCTCGTTCTGATGTCCACATGAATCTTCCAGCACTTCAGAAATTGGACTCTATGCTTATTGAGACACTAGAATCCATGGTGAATACTGAGTTTTGGTATGAAGAGGGAGGAAGCCGGGCAGAAAGGAGGAGCACGAGTGTAAGACAAAGCAAAAGATGGTGGTTGCCCTCACCCCAAGTACCAAGTACTGGGCTTTCGGACACTGAACGAAAGAGGTTGATTCATCGGGGAAGGGTGGTACACCAAATATTCAAGGCTGCCAAATCGATAAATGATAATATTTTGCTTGAAATGCCTGTTCCAACAATTATTAAAGATGCACTTCTAAAGTCTGGAAAGGCAAGCCTGGGAGAGGAATTGCACATGGTTTTGACAGCTGAATCAAGCAGTGGAGAAGAAATGCTCAAGTATCTTAATTTAAAAACTGAACATAAAGCCTTAGAGACTGTTAATAAATTAGAAGCTGCTATGTTTTCATGGAAAGAAAGAATGAGAATTACACAAGAAGATAGTGGCAAGTCCCCACTACGAACCTCATGGCCTTTCATGAAGGACTCCATGCCAAGTACCGAAAAGGTGGGGCTGTGGTTGGACCGTGCACAAACTCTTTTAAAGCTGCTTAAAAGTAGATACCCAAACCTTCCTCAAACATTTCTTGATGCTGCCAAAGTTCAGTATGGCAAGGATATTGGGCATTCCATTCTGGAAGCATATTCCAGAGTTCTTGCAAGTTTAGCCTTAAGCATACTATCTAGAATAGGGGATATACTGCAGGAGGATGCTTTAAGCAATCCGAATTCCCCCATGGCATCAATTAATTCTTACTCTCCTGGGACAAGTCTTTCAGAATCTTGGGTGGCTAGCTCACATGTCAAGCACTCGTTGATTGATAAGATGAACAAGGCAGATGTACAGTACTGTGAATCTAGCTGCGATAGTAATTCTGATTTAGAGCTTTCATCTGCAGAGGCCAAAGCCAACTCTGTAACTAGCACACCAAGCCGTAATCGAGTTTGGTGCATTGGTAGAGAGGCTTGTAAAAGTGTGTCTCCCTGA 1608 0.4291 MLVMRKRLACCTRTSKISTDFDHDHQARIMTYDGLESCILDNQSSEDESRTSRGDGCITDSFNDEWELSQSPQHFYVKEKPAYAMQCSDVEAMREKFSKLLLGDDITGGTKGLNTALALSNAISSLSVTVFGELWKLEPLPEERKSKWQREMDWLLSPTNYMVELVPAKQNAANGGIFEIMTPKARSDVHMNLPALQKLDSMLIETLESMVNTEFWYEEGGSRAERRSTSVRQSKRWWLPSPQVPSTGLSDTERKRLIHRGRVVHQIFKAAKSINDNILLEMPVPTIIKDALLKSGKASLGEELHMVLTAESSSGEEMLKYLNLKTEHKALETVNKLEAAMFSWKERMRITQEDSGKSPLRTSWPFMKDSMPSTEKVGLWLDRAQTLLKLLKSRYPNLPQTFLDAAKVQYGKDIGHSILEAYSRVLASLALSILSRIGDILQEDALSNPNSPMASINSYSPGTSLSESWVASSHVKHSLIDKMNKADVQYCESSCDSNSDLELSSAEAKANSVTSTPSRNRVWCIGREACKSVSP 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g01231 535 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 88 448 IPR005512 GO:0005085
Arst1g01231 535 Gene3D PRONE domain, subdomain 1 328 454 - -
Arst1g01231 535 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 45 516 IPR038937 GO:0005085
Arst1g01231 535 FunFam Rop guanine nucleotide exchange factor 14 315 453 - -
Arst1g01231 535 FunFam Rop guanine nucleotide exchange factor 14 82 313 - -
Arst1g01231 535 ProSiteProfiles PRONE domain profile. 80 454 IPR005512 GO:0005085
Arst1g01231 535 Gene3D PRONE domain, subdomain 1 82 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g01231 Arst-Chr1 12183744 12189091 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g01231 - - aprc:113860057 813.527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g01231 1 12183744 12189091 Arst1g01231 1 12183744 12189091 ECH
Arst5g00322 5 2614125 2621021 Arst1g01231 1 12183744 12189091 PCT