Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g01228 ATGGAGGCATTGGCGTCAAACCCCCGAAGAAGCACTGCCTCCAACAAACAGCAACAAGAAGCGAAGATTCCGAAACCCCAACGACCGAACCAATTTCCATCACACCGGGACGCGGTGCACGTGTCCCCAAATGCGAGAAAACTGTGCGAGCTGCTGACGCGAACCCCTCCTAACGACATCGAAACTGCCCTAACTAACTGTGGGATCCGGCCTTCCCAAGATGAGGTCCACGAGGTCCTCGGGCTGTCCTACAGCGTGCCGTCGTCGGCCGTGAAGTTCTTCCGGTGGGCCGGGCAGCTTCAAAAGCACTCGGGCCATGCCTGGAACTTGATGGTGGACCTGTTGGGGAAGAACGGGGTGTTTGAGTACATGTGGGACGCCATCAGGTCCATGAAGCAGCAAAAGCAGCTGGCATTGCCCACCTTTGTCTCCGTTTTCGAGAGCTACTGCACTGCTGGCAGGTTCAATGAAGCCTTTATGAGCTTCGATGTTATGGACAGGTACGGCATTCAGCCCGACGTTGTTGCCGTCAATTCCCTCCTCAGCGCCATCTGCCGCGAGGACAATCAGACAACCGTCGCATTGGAGTTCTTCCATAAGATCAAGGGCAAGATTCCGCCCGACGGGGATACTTTCGCCATTTTGCTGGAGGGCTGGGAGAAGGAAGGAAATGCCGCCAAGGCCAAGAGCACGTTCGGCGAGATGGTGGTTAGAATTGGTTGGGATAGGAAGAACATGGCTGCCTACGATGCTTTCTTGATGACATTGGTTCGTGCATTGCAGGTTGATGAGGCTGTCAAGTTCTTGAAGGTGATGAAGGACCATGACTGCTTCCCAGGTTTGAAATTCTTTACCAATGCTCTTGATATTATCATCAAGCAAAACGATGCGGCTAATGCTGTCATTTTGTGGGATGTCATGCTTGAGAGTGCCTTGGTAGTGCCTAACTTAGTAATGTACAATGCTGTCATTGGCTTGCTTTGCAATAACAATCAGATAGATCACGCCTTTCGCCTGCTCGATCAGATGGCGTTTCAGGGTGTTTTCCCTGACTCCCTCACTTATAACATTGTTTTTGAGTGTTTGGTGAGGAACAAGAAGGTTCATGTGGCCGAGAGGTTCTTCAACGAGATGGTGAAGAACGAGTACCCGCCCACCAGTACCAACTGTACCTCGGCCATTGCAATGTTCTTTGATCGTGATGATCCTGAAGCAGCGCAATCGATTTGGACTTACATGGTTGAGAATCATATTAAGCCGCTCAGTGATGCTGCCAATGAGGTGCTACTTGGTCTTTGTCAGCTGGGCCGGCTCTCGGAGGTGAAAAGGTCAGCGGAAGACATGCTGGATTGGAAGATCATGATATATGAGTCCACAATGGCAAAGTTGAAGGATGCATTCTATAGAGATAGTAGGACTGCGAGGGACAGATATGACAGTCTGTCCAGGAGGTGGAAAGCTCATGGCAAATTGTAA 1476 0.5088 MEALASNPRRSTASNKQQQEAKIPKPQRPNQFPSHRDAVHVSPNARKLCELLTRTPPNDIETALTNCGIRPSQDEVHEVLGLSYSVPSSAVKFFRWAGQLQKHSGHAWNLMVDLLGKNGVFEYMWDAIRSMKQQKQLALPTFVSVFESYCTAGRFNEAFMSFDVMDRYGIQPDVVAVNSLLSAICREDNQTTVALEFFHKIKGKIPPDGDTFAILLEGWEKEGNAAKAKSTFGEMVVRIGWDRKNMAAYDAFLMTLVRALQVDEAVKFLKVMKDHDCFPGLKFFTNALDIIIKQNDAANAVILWDVMLESALVVPNLVMYNAVIGLLCNNNQIDHAFRLLDQMAFQGVFPDSLTYNIVFECLVRNKKVHVAERFFNEMVKNEYPPTSTNCTSAIAMFFDRDDPEAAQSIWTYMVENHIKPLSDAANEVLLGLCQLGRLSEVKRSAEDMLDWKIMIYESTMAKLKDAFYRDSRTARDRYDSLSRRWKAHGKL 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g01228 491 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 245 279 IPR002885 -
Arst1g01228 491 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 316 350 IPR002885 -
Arst1g01228 491 Pfam PPR repeat family 144 186 IPR002885 -
Arst1g01228 491 Pfam PPR repeat family 315 363 IPR002885 -
Arst1g01228 491 Gene3D Tetratricopeptide repeat domain 283 490 IPR011990 GO:0005515
Arst1g01228 491 Gene3D Tetratricopeptide repeat domain 85 248 IPR011990 GO:0005515
Arst1g01228 491 PANTHER PPR_LONG DOMAIN-CONTAINING PROTEIN 59 467 - -
Arst1g01228 491 MobiDBLite consensus disorder prediction 1 39 - -
Arst1g01228 491 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 138 172 IPR002885 -
Arst1g01228 491 Pfam PPR repeat 107 133 IPR002885 -
Arst1g01228 491 NCBIfam pentatricopeptide repeat 141 174 IPR002885 -
Arst1g01228 491 NCBIfam pentatricopeptide repeat 354 386 IPR002885 -
Arst1g01228 491 NCBIfam pentatricopeptide repeat 318 351 IPR002885 -
Arst1g01228 491 MobiDBLite consensus disorder prediction 7 25 - -
Arst1g01228 491 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 351 385 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g01228 Arst-Chr1 12166987 12168928 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g01228 141 453 Glycosyltransferase AT1G05670 23.003 8.25e-20 90.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g01228 - - gmx:100796114 693.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g01228 1 12166987 12168928 Arst1g01228 1 12166987 12168928 ECH