Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g01039 ATGGCTGCCGCCGTTACGGCCTCAGTCTCCTTCCCATCTACCAAGTCTGCCTCTCTCTCGAGCCGCACCTCCATCGTCGCCCCGGAGAGAGTCGTATTCAAAAAGGCTTCATTGCAATGGAGAGATGTTTCGGTTTCAATAAGAGCTCAAGTTACAACCACGGAGACAGAGACGACACAGACACCAACAAAGGTGGAGAAGGAGCACAAGAAGCAGGAAGAAGGTGTGGTTGTGAACAAGTTCAAGCCTAAGAACCCATACATTGGAAGGTGCTTGCTCAACACTAAGATCACTGGTGATGATGCTCCTGGTGAAACTTGGCACATGGTCTTCAGCACTGAGGGAGAGGTTCCATACAGAGAAGGGCAATCAATTGGGGTAATTCCTGAGGGAGTTGACAAGAATGGGAAGCCTCATAAACTCAGATTGTATTCCATTGCCAGCAGTGCCCTTGGTGACTTTGGAGACTCCAAAACTGTTTCACTATGTGTGAAGAGGCTTGTTTACACAAATGAAAATGGAGAGATTGTCAAAGGAGTTTGCTCAAATTTCTTGTGTGATTTGAAGCCTGGAGCTGAAGTAACAATTACAGGACCTGTTGGGAAAGAAATGCTTATGCCAAAAGATCCTAATGCCACCATCGTAATGTTGGCAACTGGAACTGGAATTGCCCCATTCCGCTCATTTTTGTGGAAAATGTTCTTCGAAAAGCACGACGATTACAAGTTCAATGGTTTGGCATGGCTCTTCTTGGGTGTTCCCACAAGCAGCTCACTGCTTTACAAGGAGGAATTTGAGAAGATGAAGGAGAAAGCACCTGAGAACTTCAGGCTTGACTTTGCTGTGAGCAGAGAGCAAACAAATGAGAAAGGAGAGAAGATGTACATCCAAACCAGAATGGCTGAGTATGCAGAAGAGCTTTGGGAGTTGCTCAAGAAAGATAACACTTTTGTTTACATGTGTGGACTTAAAGGAATGGAGAAAGGAATTGATGACATTATGGTCTCTTTGGCTGCTAGAGATGGAATTGACTGGATTGAGTACAAGAGACAATTGAAGAAAGCAGAGCAATGGAATGTGGAAGTGTACTAA 1092 0.4496 MAAAVTASVSFPSTKSASLSSRTSIVAPERVVFKKASLQWRDVSVSIRAQVTTTETETTQTPTKVEKEHKKQEEGVVVNKFKPKNPYIGRCLLNTKITGDDAPGETWHMVFSTEGEVPYREGQSIGVIPEGVDKNGKPHKLRLYSIASSALGDFGDSKTVSLCVKRLVYTNENGEIVKGVCSNFLCDLKPGAEVTITGPVGKEMLMPKDPNATIVMLATGTGIAPFRSFLWKMFFEKHDDYKFNGLAWLFLGVPTSSSLLYKEEFEKMKEKAPENFRLDFAVSREQTNEKGEKMYIQTRMAEYAEELWELLKKDNTFVYMCGLKGMEKGIDDIMVSLAARDGIDWIEYKRQLKKAEQWNVEVY 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g01039 363 PIRSF Frd-NADP+_RD 1 363 IPR015701 GO:0016491
Arst1g01039 363 SUPERFAMILY Riboflavin synthase domain-like 64 207 IPR017938 -
Arst1g01039 363 CDD CYPOR_like_FNR 79 363 - -
Arst1g01039 363 Gene3D - 201 363 IPR039261 -
Arst1g01039 363 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 245 254 IPR001709 GO:0016491
Arst1g01039 363 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 142 149 IPR001709 GO:0016491
Arst1g01039 363 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 119 129 IPR001709 GO:0016491
Arst1g01039 363 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 179 188 IPR001709 GO:0016491
Arst1g01039 363 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 257 268 IPR001709 GO:0016491
Arst1g01039 363 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 215 234 IPR001709 GO:0016491
Arst1g01039 363 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 293 309 IPR001709 GO:0016491
Arst1g01039 363 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 317 325 IPR001709 GO:0016491
Arst1g01039 363 FunFam Ferredoxin--NADP reductase, chloroplastic 201 363 - -
Arst1g01039 363 PANTHER - 4 363 IPR015701 GO:0016491
Arst1g01039 363 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 204 363 IPR039261 -
Arst1g01039 363 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 84 206 IPR017927 GO:0016491
Arst1g01039 363 FunFam Ferredoxin--NADP reductase, chloroplastic 68 200 - -
Arst1g01039 363 Gene3D Translation factors 54 200 - -
Arst1g01039 363 Pfam Oxidoreductase NAD-binding domain 216 330 IPR001433 GO:0016491
Arst1g01039 363 PIRSF FNR-PetH 1 363 IPR035442 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g01039 Arst-Chr1 10398147 10401623 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g01039 K02641 - gmx:100802032 672.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g01039 1 10398147 10401623 Arst1g01039 1 10398147 10401623 ECH
Arst1g01039 1 10398147 10401623 Arst5g00533 5 4424436 4427076 ECH
Arst5g00533 5 4424436 4427076 Arst1g01039 1 10398147 10401623 PCT