Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g00469 ATGGCAGATGACTGTGCATCAAACGACAGCACACCACTGCTGCAAACCCAGTATGCGGAATCGGAGCCGAAAAGAACAGGGACGGTGTGGACAGCAGTGGCGCACATAGTGACAGGTGTCATAGGTTCAGGAGTGCTCTCACTCGCATGGAGCATAGCCCAGCTTGGATGGATCGGAGGCCCTCTCGCAATGCTTCTCTTCGCTTCCATCACTCTTCTTTCCTCTTTTCTTCTCAGCAACACCTATCGCTCCCCCGACCCTGAATATGGACCCAAACGGAGTTCTTCTTATCTTGACGCCGTTAATATTCATCAGGGAGTTGGAACTGGAAGGCTCTGTGGTGTTTTCGTGAATGTGAGCTTATATGGTTTTGGAATTGCCTACATTATTACTTCAGCTATCAGCATGAGAGCAATCCAAGAATCAAACTGTCACATTAAGAACGGGAATGGTGCATGTGAGTTTGGGGATTCATACTACATGCTTATATTTGGAGTTATCCAGATTCTTCTTTCACAGATACCAAACTTCCATAACATTCAGTGGCTTTCGGTTGTCGCGGCGGTTATGTCCTTCGCTTATGCCTTCATAGGAATGGGGTTCGCCATCAAGCAAACCGTAGAAAAAGGATATGCTGAGGGTACCATTGAAGGAATTCCTACTTCTACTGATGTTCAAAAGATGTGGCTGGTTGCTCAAGCTCTTGGTGACATAGCATTCTCCTATCCATTCTCAGTAATTCTTATAGAAGTACAGGATACCTTGAAGTCACCTCCTCCTGAAAACGTAACCATGAGGAGGGCCTCGCTAATAGCAGTCATTATCACGACGTTTTTCTACCTCTGTTGCGGCTGTGCTGGATATGCAGCTTTCGGCAATGACACACCGGGAAACCTTTTAACAGGGTTTGAATTTGCAAGGCCTCACTGGCTAGTAGACTTTGCCAATGCTTGTATAGTTGTTCATCTTGTTGGTGCATATCAGGTGTATAGCCAGCCACTCTTCGCCAATGTTGAGAATTGGCTTCGGTTCAAATTCCCGGACAGTGATTTTGTGAATCAAACATATAACTTGAAACTTCCTTTTCTGCCAGCTTTTCCGTTAAACTTCCTTCGGCTTACTTTCCGAACTGCTTATGTTGTGTCCACAACCATCATTGNNNNNNNNNNNNNNNAGATCTTGGGGGTTCTTGGTGGCATAATCTTTTGGCCATTAACGATATATTTTCCGGTGGAAATGTACTTGAGTCAGGGCAACATTCAACCATGGACGACGAAGTGGGTCTTGCTTAGAACTTTTAGCATTGTTTGTTTTGTGGTGGGAATGTTTACTCTTGTTGGATCCATTGAAGGAATAATAAGTGCAAAATTAAGCTGA 1377 0.443 MADDCASNDSTPLLQTQYAESEPKRTGTVWTAVAHIVTGVIGSGVLSLAWSIAQLGWIGGPLAMLLFASITLLSSFLLSNTYRSPDPEYGPKRSSSYLDAVNIHQGVGTGRLCGVFVNVSLYGFGIAYIITSAISMRAIQESNCHIKNGNGACEFGDSYYMLIFGVIQILLSQIPNFHNIQWLSVVAAVMSFAYAFIGMGFAIKQTVEKGYAEGTIEGIPTSTDVQKMWLVAQALGDIAFSYPFSVILIEVQDTLKSPPPENVTMRRASLIAVIITTFFYLCCGCAGYAAFGNDTPGNLLTGFEFARPHWLVDFANACIVVHLVGAYQVYSQPLFANVENWLRFKFPDSDFVNQTYNLKLPFLPAFPLNFLRLTFRTAYVVSTTIIGXXXXXXILGVLGGIIFWPLTIYFPVEMYLSQGNIQPWTTKWVLLRTFSIVCFVVGMFTLVGSIEGIISAKLS 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g00469 459 PANTHER OS05G0424000 PROTEIN-RELATED 24 449 - -
Arst1g00469 459 Pfam Transmembrane amino acid transporter protein 25 454 IPR013057 -
Arst1g00469 459 Gene3D Amino acid/polyamine transporter I 22 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g00469 Arst-Chr1 4446864 4451657 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g00469 4 454 Organic Solute Cotransporters AT5G09220 49.130 8.84e-159 457
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g00469 K24917 - gmx:100801302 738.799
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g00469 1 4446864 4451657 Arst1g00469 1 4446864 4451657 ECH
Arst1g00469 1 4446864 4451657 Arst7g00201 7 1244068 1246810 PCT