Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g00467 ATGGAACTAAAAGACTCTTTCCAAGTATCAAGAATCGGTGATGCCTACGACGACGATGGCCATCCCAAGAGAACCGGAACCGTGAAGAGCGCGGTGGCTCATATTGTTACGGCGGTGATTGGATCCGGCGTTCTGTCTCTTGCTTGGAGCACTGCACAGTTAGGATGGATCGGAGGGCCGGTTGCGTTGCTCTGCCTCGCAATCGTCACATATATTTCGTCGTTTCTTTTATCCGATTGTTACAGGACACCGGACCCTGTAACTGGGAAAAGAAACTACTCTTACATGGATGCTGTTACAAACAATCTTGGTAAAAAAAGGACAGTGGTGGCTGGTTTCCTTCAATTTGTGATCTTGTATGGAACTTGTGTCGCATATGTTATTACCACAGCAACTAGTATGAGGGCGATTCTGAAATCAAATTGTTACCACAAGGAAGGGCATGATGCTCCATGCAACTATGGAGATAATTTGTATATGGTGATATTTGGAGCAATTCAGATAGTAATGTCATTCATACCAGATCTTCACAACTTAGCATGGGTTTCAATTGTTGCAGCAGCTATGTCCTTCACATATTCATTCATAGGACTTGGACTTGGCATAGCAACAGTCATAGAAAATGGAAGCATTATGGGTAGGGTAACAGGAATATCAACTAGAACTGCTGCAGACAAAATATGGTTGGTGTTTCAAGCACTTGGCGACATTGCATTCGCTTATCCCTACTCTGTTCTCCTCCTTGAGATTGAGGACACATTAAAGTCTTCTCCACCGGAAAACCAAAGCATGAAGAGGGCATCCATGATTGCAATCTTCATCACAACATTCTTCTATCTCTGTTGCGGATGCTTTGGATACGCTGCGTTCGGAGATTCTACGCCGGGAAACCTGCTCACTGGGTTTGGATTCTATGAGCCTTTCTGGCTTGTTGACATTGCTAATGTTTGCATCATTATTCATTTGGTTGGAGGATATCAGATTTACAGTCAACCAATATATGGTGCAGTTGAGAGATGGTGCTCAAGAAAATACCCCAACAGTGGTTTTGTGGCAAAATTCCACAAAGTGAAACTACCCCTATTGCCCCGTTTTGAGATCAACCTCTTCAGGTTCTTTTTCAGAACAATCTTTGTGATCACAACAACTGTACTTGCAATCCTTTTCCCTTACTTCAACGAAGTTCTTGGAGTGTTAGGAGCAGTAAACTTTTGGCCATTGGCCATTTACTTCCCAGTGGAGATGTACTTCAAGCAGAACAAAATTGAAGCATGGAGTAATAAATGGATTGTTCTAAACTTATTCAGCTTTGCTTGCTTTCTTGTCACTGCAGTGGGACTTGTGGGGTCCATTCAAGGAATTGTACAAGCCAAGCTTAGTTCTAGTTAA 1389 0.4284 MELKDSFQVSRIGDAYDDDGHPKRTGTVKSAVAHIVTAVIGSGVLSLAWSTAQLGWIGGPVALLCLAIVTYISSFLLSDCYRTPDPVTGKRNYSYMDAVTNNLGKKRTVVAGFLQFVILYGTCVAYVITTATSMRAILKSNCYHKEGHDAPCNYGDNLYMVIFGAIQIVMSFIPDLHNLAWVSIVAAAMSFTYSFIGLGLGIATVIENGSIMGRVTGISTRTAADKIWLVFQALGDIAFAYPYSVLLLEIEDTLKSSPPENQSMKRASMIAIFITTFFYLCCGCFGYAAFGDSTPGNLLTGFGFYEPFWLVDIANVCIIIHLVGGYQIYSQPIYGAVERWCSRKYPNSGFVAKFHKVKLPLLPRFEINLFRFFFRTIFVITTTVLAILFPYFNEVLGVLGAVNFWPLAIYFPVEMYFKQNKIEAWSNKWIVLNLFSFACFLVTAVGLVGSIQGIVQAKLSSS 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g00467 462 PANTHER OS05G0424000 PROTEIN-RELATED 30 450 - -
Arst1g00467 462 Pfam Transmembrane amino acid transporter protein 24 455 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g00467 Arst-Chr1 4411761 4415760 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g00467 16 455 Organic Solute Cotransporters AT5G09220 54.628 0.0 526
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g00467 K24917 - gmx:100818535 762.296
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g00467 1 4411761 4415760 Arst1g00467 1 4411761 4415760 ECH
Arst1g00467 1 4411761 4415760 Arst7g00205 7 1256594 1260729 PCT