Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g00449 ATGCCAGCAATTGCAATGACCGGGGCATCTTTCCCTGCTTATCCAAATTACTTCTCCAGGGCTCCTGGGGGACCAGATCAAAAGTTGAATATTGGATTGATTGGCAATGGTGCCGGTGCTCCACCTCAGTCACTCCACTTAGGTTCCAATTGGTCGATGTTAGGATCAGATAAGTATGGTGTCCAACCACTTCCCCTATGGCTGCTTGGTGCAAATTATAGCTCTGGACTTCCCATTGAAAATTCCAACAGTCAAAACCTATCTGTACCAAAGGGGTGGCGGAATGGGGATTGGATCTGTAATTGTGGCTTCCATAATTACTCTTCACGCTCGCAGTGTAAAAAATGCGACGCTTTTCCACCTGCACTTGGGACAAAACGGTTAGCTTCTGAAGAATTGGTTGATGACTGGGACAAGAAGAGATTGAACGTGGGACCTACTAATGACCAAGTAGTAGGGACAAGTGGAGATCCAAAACCTGGAGTGCTCCCGTCATTTCCTAGCATAAACTCAAGCATAGCTTCAACGTTGCCAATACCGACTCTATTTCCACCTCAAGTTTCTACACCTGCACTCCTTGGAAAAGGAGCAAAGCAATGGCGTAGTGGAGATTGGATGTGCACAAATTGCAACAACCATAATTATGCTTCCAGATTACAGTGTAACAGGTGTAAAACTCAGAGAGTTTCACCCGCGCAACCCAGCAATGCATTGTAA 717 0.4589 MPAIAMTGASFPAYPNYFSRAPGGPDQKLNIGLIGNGAGAPPQSLHLGSNWSMLGSDKYGVQPLPLWLLGANYSSGLPIENSNSQNLSVPKGWRNGDWICNCGFHNYSSRSQCKKCDAFPPALGTKRLASEELVDDWDKKRLNVGPTNDQVVGTSGDPKPGVLPSFPSINSSIASTLPIPTLFPPQVSTPALLGKGAKQWRSGDWMCTNCNNHNYASRLQCNRCKTQRVSPAQPSNAL 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g00449 238 ProSiteProfiles Zinc finger RanBP2 type profile. 201 230 IPR001876 -
Arst1g00449 238 Gene3D - 88 122 - -
Arst1g00449 238 Gene3D - 196 231 - -
Arst1g00449 238 SUPERFAMILY Ran binding protein zinc finger-like 91 119 IPR036443 -
Arst1g00449 238 PANTHER ZINC FINGER PROTEIN 65 230 - -
Arst1g00449 238 SMART zf_4 203 227 IPR001876 -
Arst1g00449 238 SMART zf_4 96 119 IPR001876 -
Arst1g00449 238 Pfam Zn-finger in Ran binding protein and others 201 228 IPR001876 -
Arst1g00449 238 SUPERFAMILY Ran binding protein zinc finger-like 195 230 IPR036443 -
Arst1g00449 238 ProSitePatterns Zinc finger RanBP2-type signature. 205 224 IPR001876 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g00449 Arst-Chr1 4154015 4156713 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g00449 - - gmx:100784874 399.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g00449 1 4154015 4156713 Arst1g00449 1 4154015 4156713 ECH