Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g00420 ATGGGAGCAGTAGGTATGGGGTACTCTCCATTGTTCGAGACAAATAAGGGAAGAGGGAGAGTGATCTATAGGCCCTTTGCAATCTCATTATTTCTGGCCATATTCTTCATTTGGGTTTATAGACTCACCTACATACCTTCAAAGCTTGAAGATGGCAACATCTGGGTATGGCTTGGTATGTTTGGTGCAGATTTATGGTTTGGTCTTTATTGGCTTCTCACTCAAGCACTCCGTTGGAACCTTGTCTTCAGGCACACTTTCAAGGACACCCTCTCTCAAAGATATGAGGACAAGTTGCCAGGAGTGGACATATATGTGTGTACGGCAGATCCAGAAATAGAACCACCAATGATGGTGATTAACACAGTTCTCTCTGTTATGGCTTATGACTATCCAACTCATAAGCTTAGTGTCTATCTCTCTGATGATGGAGGTTCAGATATTACTTTCTATGCTCTCTTAGAGGCATCTAATTTTGCTAAGCATTGGTTGCCATTTTGCAAGAAGTTCAACATTGAACCAAGGTCTCCGGCGGCTTATTTTAATAACATTTTCTCAATGGCACACCAAAATAATCAATATGATGATCACACTCACAATATAGAGTTGGCGGCTATAAAGAAATTATACGACGAAATGGAAAAGAGAATTCAGGACTCCACGAAGATGGGTGAAGTACCCAAAGAAGCACGTTTAAAGCACAAAGGATTTTCTCAATGGGATTCATATTCTTCTAAACTTGATCATGACACAATTCTTCAAATAATACTTGATAAAAAGGACCCAAATAATTCGAAGGACGTAGATGGGGTTGTTCTACCAACTTTGGTGTATTTAGCTAGGGAGAAGAGACCCCAACATTCCCACAACTTTAAAGCTGGAGCTATGAATTCACTGTTAAGGGTGTCTTCTTCTATTAGCAACGGCAAAATAATTCTGAATGTGGACTGTGATATGTACTCAAACAATTCAAAATCGGTGAGAGATGCTTTGTGTTTTTTCATGGATGAAGAAAAAGGCCATGAAATTGCTTTTGTGCAATTTCCACAGAACTTTGAGAATGTCACCAAGAATGATTTATATGGGAGTGGTCTAATAACAATTAGCCAGGTGGAGTTCCATGGTGCAGATGGTTTTGGTGGCCCTTTGTATATAGGGACTGGTTGCTTTCACAGGAGAGATACACTTTGTGGAATGAAGTTTAATAATGGTCAAAACAGGATTAATGATTGGACTAATAATGAAAATGATCAAAGTCTAGAAGAAAACTTGCAGGAATTGGAAGAAAGATCAAAGGTCCTCGCAAGTTGTACCTATGAGGAAAACACATTATGGGGGAAAGAGATGGGTTTAAGATATGGATGTCCAGTGGAAGATGTAATAACAGGATTGGCTATACAATCCAATGGATGGAAATCAGTGTACTACAACCCAAAAAGGAAGGCCTTCTTAGGAGTAGCTCCAACAACACTACATCAGACACTTGTACAACATAAGAGATGGTCTGAAGGTGACTTCCAAATTTTGCTTTCTAAGTATAGTCCTGCTTGGTTTGCACATGGTAGAATCAGTTTGGGCCTTCAAATGGGGTATTCTACTTATTGCTTATGGGCCTCAAACTCTTTGGCAACAGTATACTACTCAATTATCCCTTCATTGTATCTCCTTAAAGGCACTTCCTTGTTCCCAAAGATGTCAAGCCCATGGTTCATACCCTTTGCATATGTTATTATTGGGGAAACAAGTTATAGTTTATTGGAATTTTTATTCTCTGGAGGCACAATTCAAGGTTGGTGGAATGACCTAAGGATATGGCTATACAAGAGAACAACTTCATACTTGTTTGCCTTCATTGACACCATCTTAAAGCTCTTCGGAGTCTCCGATTCGGCCTTTGTAATCACGGCGAAAGTCGCCGGAGAAGATGTGTCGAAACGCTACGAGAAAGAAATCATGGAGTTTGGAACCTCCTCTCCAATGTTCACTATGCTATCAACACTTGCATTGCTCAATTTGTTTTGTTTTCTTGGGTTGTTGAGGGAAGGTAGCACTCTTGAAGCATTTGAGGAAATGTTTTTGCAAACTATGTTGTGTGGCTTTTTGGTTCTTATCAATTTGCCTATATACCAAGGACTTTTCTTAAGAAGGGATAATGGAAGATTACCAACCTCTCTTGCCATTAAATCAACCGCATTAGCTCTAAGTCTGATTATCTTCTTCAGAAGCCTTGCATGA 2235 0.396 MGAVGMGYSPLFETNKGRGRVIYRPFAISLFLAIFFIWVYRLTYIPSKLEDGNIWVWLGMFGADLWFGLYWLLTQALRWNLVFRHTFKDTLSQRYEDKLPGVDIYVCTADPEIEPPMMVINTVLSVMAYDYPTHKLSVYLSDDGGSDITFYALLEASNFAKHWLPFCKKFNIEPRSPAAYFNNIFSMAHQNNQYDDHTHNIELAAIKKLYDEMEKRIQDSTKMGEVPKEARLKHKGFSQWDSYSSKLDHDTILQIILDKKDPNNSKDVDGVVLPTLVYLAREKRPQHSHNFKAGAMNSLLRVSSSISNGKIILNVDCDMYSNNSKSVRDALCFFMDEEKGHEIAFVQFPQNFENVTKNDLYGSGLITISQVEFHGADGFGGPLYIGTGCFHRRDTLCGMKFNNGQNRINDWTNNENDQSLEENLQELEERSKVLASCTYEENTLWGKEMGLRYGCPVEDVITGLAIQSNGWKSVYYNPKRKAFLGVAPTTLHQTLVQHKRWSEGDFQILLSKYSPAWFAHGRISLGLQMGYSTYCLWASNSLATVYYSIIPSLYLLKGTSLFPKMSSPWFIPFAYVIIGETSYSLLEFLFSGGTIQGWWNDLRIWLYKRTTSYLFAFIDTILKLFGVSDSAFVITAKVAGEDVSKRYEKEIMEFGTSSPMFTMLSTLALLNLFCFLGLLREGSTLEAFEEMFLQTMLCGFLVLINLPIYQGLFLRRDNGRLPTSLAIKSTALALSLIIFFRSLA 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g00420 744 FunFam Cellulose synthase-like protein E1 241 415 - -
Arst1g00420 744 FunFam Cellulose synthase isolog 92 189 - -
Arst1g00420 744 SUPERFAMILY Nucleotide-diphospho-sugar transferases 117 555 IPR029044 -
Arst1g00420 744 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 246 411 IPR029044 -
Arst1g00420 744 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 92 193 IPR029044 -
Arst1g00420 744 Pfam Cellulose synthase 427 738 IPR005150 GO:0016020|GO:0016760|GO:0030244
Arst1g00420 744 Pfam Cellulose synthase 102 405 IPR005150 GO:0016020|GO:0016760|GO:0030244
Arst1g00420 744 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 10 731 - -
Arst1g00420 744 Coils Coil 203 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g00420 Arst-Chr1 3849990 3859608 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g00420 10 735 Glycosyltransferase AT1G55850 57.397 0.0 846
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g00420 - - gmx:100815825 1110.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g00420 1 3849990 3859608 Arst1g00420 1 3849990 3859608 ECH
Arst1g00420 1 3849990 3859608 Arst7g00250 7 1586738 1594715 PCT