Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g00417 ATGAACCCAACACCAAGGAAACTCGCACTCTCACTCTCACGTGCGCTCTCACGTGCCCTAACTACCGCCACCGCCGCAGCCTCGCAATCTGGATCGGCTTTCCCTCTCAAGACGGTTACCACCAAAAACTTCGAAGCTTCTCTTTCGGAGCTCCGGGACCATGTCCGAACCTCCGATTTTGTGGCCATCGACCTTGAGATGACCGGCGTAACCAGTGCGCCCTGGCGGGAGTCCTTCGAGTTCGACCGCTCCGACGTCCGGTACCTGAAGGTCAGGGACTCCGCCCACAAGTTTGCCGTCATTCAGTTCGGCGTCTGCCCCTTCCGTTGGGACTCTTCCAACCACTACTTCGTCGCTTATCCGTACAATTTCTATGTTTTTCCACATCAGGAGCTTGAGGATCTGGCTCCATGTTATGAATTTCTCTGCCAGACTACTTCAATGGATTTCTTGGCTAAATACCAGTTTGATTTCAATGCATGCATACGTGAAGGAATATCTTATTTATCTAGAGCGCAAGAAAGGGAAGCAGTAAGGAGATTGAATTCTAGATACGAAAGTGAGCATTCAAACATTTGTAAATTAAAAGACGTTAAAGGCATACAATTGATCAGCATGGCAGACATATTGTTCTCTGAACGAATGAAAAACAAATTCAGTAAATGGCGTGATGGGTTATTACAGGAGCAAAGTCGAGAAGAACAAATTATAGGAACTTCAAAAGACTCAAAACAGCTATTTGAAGTGATTTTCTTTAAGATGCATCCTGCTATTAGACTTAGTGGATTTACATCTCGGCAGCTAAAATTGATTCAGTTGGTCATCAGAAAACACTTTCAAGATTTGTCATATGTATGTGTGAATAGCGAAGATTCTGGTTCACAACATATGGTTGTATATACAGACTCAAGGGATGAACTAAACTTACTTCTGAAGGAGGTAAAAGATGGAAATCGCAAGGCAGAAGAGAAGAAGATTCAAAATGCTGTGGGATTTCGCCATGTTATTGATCTCCTTTCTGCAGAAAAGAAGTTGATTGTTGGTCATAATTGTTTTCTGGATATTGCTCATGTCTACAACAAATTTATAGGTCCCCTTCCAGGGACTCCTGAAGAGTTTGTCACCTCTATTAACAAGTATTTTCCGCACATTGTTGACACTAAAATACTCTTCAACAATAATCATGTGCTCCAAGAAAAGATGAAAAGGTCAAGAAAATCACTGGCCTCTGCATTTTCCTTGTTTTGTCCACAAATTGCAGTAGGTTCCAACAGCAGTGATCTTGATTCACCCTTACATGTGAAAGTGAATGTTGAAGTTAATGATTTGAGATCATCGAGCTGGAACCCTGGAGCCAAGCATGAGGCCGGATATGATGCTTTTATGACTGGTTGTATCTTTGCTCAAATATGCAGTGATTTAGGAGTTGATTATAAACACCATGAATCTTCTCCACAACAATTAGCCCTTAATGAGAAACTACAAAAGTATGTTAACCATCTATATCTTAGTTGGATACATGGGGACATTATTGATCTGAATACCGGTGATAAGGTTGCAGAATCTACACCAAGCAATAACCTCAAGAGGCAATATCCAAAGATTTTGTTTGAAAATATTGTTATTATTTGGGGTTTTCCTTCTCAGCTGAAGGCAAATGATCTAAGAGTGTGCATATCTAAAGTTTTTGGTCCAGCTTCTGTGGTTTCTGTCTACCACTTGGATGCGACTGCAGTATTTGTGCAGTTTAGTAAGACAGAACTAGTTTACGACTTCCTTTTGTTGAAGGACACCTTAGAAAGAAGTGATGGCACAATCTTGGTTTTGCACCCTCTTGCAAAGATTTTGGAAGGGGGCAATACATGCGCTGCTGATTATGATACTTACAAAGAAATCTGTGGTTCGCCCATTTCCGAAGCTTTGTTTGCCGAGCAGGCAAAGGCGGTTGGCATAAAGTGGAAGACCAAATTGGTAGAAAGCCAGGTCACATTGCAAGCCGAAGACCACGAAAGTCCAGGCGCAGAAGGTTCTGTAAATTCGGTTATGAAACTTGTAAAGACCAAACCAAACATAATTGAGCAGTTAAGAAATGCTCCATCTCATAGGAAAGTCTCATCTTTTGAGACCGAAGATTCTTGCTGTGCAGTAGAAATGAATGCTTGA 2163 0.4179 MNPTPRKLALSLSRALSRALTTATAAASQSGSAFPLKTVTTKNFEASLSELRDHVRTSDFVAIDLEMTGVTSAPWRESFEFDRSDVRYLKVRDSAHKFAVIQFGVCPFRWDSSNHYFVAYPYNFYVFPHQELEDLAPCYEFLCQTTSMDFLAKYQFDFNACIREGISYLSRAQEREAVRRLNSRYESEHSNICKLKDVKGIQLISMADILFSERMKNKFSKWRDGLLQEQSREEQIIGTSKDSKQLFEVIFFKMHPAIRLSGFTSRQLKLIQLVIRKHFQDLSYVCVNSEDSGSQHMVVYTDSRDELNLLLKEVKDGNRKAEEKKIQNAVGFRHVIDLLSAEKKLIVGHNCFLDIAHVYNKFIGPLPGTPEEFVTSINKYFPHIVDTKILFNNNHVLQEKMKRSRKSLASAFSLFCPQIAVGSNSSDLDSPLHVKVNVEVNDLRSSSWNPGAKHEAGYDAFMTGCIFAQICSDLGVDYKHHESSPQQLALNEKLQKYVNHLYLSWIHGDIIDLNTGDKVAESTPSNNLKRQYPKILFENIVIIWGFPSQLKANDLRVCISKVFGPASVVSVYHLDATAVFVQFSKTELVYDFLLLKDTLERSDGTILVLHPLAKILEGGNTCAADYDTYKEICGSPISEALFAEQAKAVGIKWKTKLVESQVTLQAEDHESPGAEGSVNSVMKLVKTKPNIIEQLRNAPSHRKVSSFETEDSCCAVEMNA 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g00417 720 Coils Coil 304 324 - -
Arst1g00417 720 SUPERFAMILY Ribonuclease H-like 29 477 IPR012337 -
Arst1g00417 720 Pfam CAF1 family ribonuclease 39 467 IPR006941 -
Arst1g00417 720 PANTHER POLY A -SPECIFIC RIBONUCLEASE/TARGET OF EGR1, MEMBER 1 39 634 - -
Arst1g00417 720 Gene3D - 275 518 IPR036397 GO:0003676
Arst1g00417 720 Gene3D - 38 251 IPR036397 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g00417 Arst-Chr1 3802210 3808122 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g00417 K01148 - gmx:100784997 1043.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g00417 1 3802210 3808122 Arst1g00417 1 3802210 3808122 ECH