Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g00403 ATGGAGGAAGGCGAAGGCGGGGATCCCATGGATCAGTTCCACCGTAACGAGGCTATATCCGCCGTCGCCGACGAGGGTTTCTTGGGCGAGGAAGACGACGACTACGAGGACCTTTACAACGACGTCAATGTCGGTGAGGGCTTCCTCCAATCGCTGCGTAAAAACGACGATCTAGCGTTTCGAAACGACGATGCCGTTCAGGACAACAGCAAGAAGCCCCAACAAGAAGCTGTCGCTGGGGTTTCGATTCCTGGTGTAGGTGGTGGTGGTGAGGGACCCGGTGGTGGTGGTGGTGGTGGGGCTGTGGATGGTGCTTCTAGGGTTTCTGGGTTTCAGAATCAGGGGTTTAGAGGGAATGATTTGGGTGCAAAACAAGGTACTGGTGGATCTGGAATTAGGGTTGAGTTGGGTCAGCCATCTGGGAAAGTGAGTGAAATTGAGGATCGGAGTGGAAATGGTGCTGGTGTTGGTGGTGGTGGTGCTGCTGCGGTGCAAGGGATTGGACAGCAGCCTCATGGTGGTGGTGGTGGTGTTGTGGGCTCCGTTGGGAATGAGGGTTTGGCCAGGCAAAGTGGTGGTGGCGGTGTTGGAGTTGCAGCTGGAGGAGATGTTAATAGGATTGGTGGGAATGGGATCGGGAACAGTGTGGGTGTAGTTAATACTATTAACACTGGTGGACCTGGACCTGGACCTGGACCTGGTGGTCCGGTGGGTGCTGGCAGTGCTGTTGCTCCTGGTGGTGGCGGCGGCGGTGGAGGTACCATATTGTTTGTGGGTGATTTGCATTGGTGGACTACCGATGCTGAACTGGAGGCTGAGCTCTGTAAGTACGGCCCTCTCAAGGAGGTGAAGTTTTTCGATGAGAAAGCTAGTGGGAAATCTAAAGGGTATTGCCAGGTTGAATTTTTTGATCCTGCAGCTGCCACTGCCTGTAAGGAAGGCATGAATGGGCATATGTTTAATGGAAGGCCTTGTGTTGTTGCCTATGCTTCGCCTTTTACAGTTAAGAAAATGGGTGAGGCTCAGGTGAATAGGAACCAGCAGATGAACCAAACAGCAGCTCCTCAGGGAAGGAGGGGGCCTGCTGAGGCAGGGGCTAAGCCTGCTGGGAGTAATATTACAACTGGCGGTAACTACCAAGGTGGAGATGCAAATAGAGGTTATGGAAGGGGTAACTGGAGAGGGAATAATCCTGGGATGGGTAATAGGGGGCCTGTTAATCCTATGAGGAATCGAGGAGGTGGTATGGGTGGTAGAGGTATAATGGGAAATGGTGGGAATGGATTTGGACAGGGCATGGGTGCTACACCTCCTATGATGCATCCTCAGTCAATGATGAATCAGGGTTTTGATCCTGCATTTGGTGGTCCCATGGGTAGAATGGGTACCTATGGAGGCTTTCCTGGTGCTCCAACACCTCCATTCTCTGGCATTTTGCCTTCATTCCCTGGTGTTGGAGGTGTTGGTTTGCCTGCACCCCATGTTAATCCTGCCTTTTTTGGAAGAGGGATGCCTGTGAATGGCATGGGGATGATGCCTGGAGCTGGTATGGATGGACCTAATATGGGAATGTGGTCTGATCCCAATATGGGTGGATGGGGTGGTGAAGAGCCTGGTGGCGGCAGGGCCGGAGAGTCAAGTTATGGGGAGGAAGCTGCATCGGATCATCAGTATGGTGAGGCAAGTCATGATAGAAGTAACTGGCCTAATTCTATGAGGGAAAAAGATAGAGGTTCGGAAAGGGACTGGTCTGGCACATCTGAAAGGAGGTACAGGGATGATAGAGATCAAGGATATGAGAGAGATGCACCCAGAGAAAAAGATGTGGGCCATGATCATGAATGGTCCGAAAGAAGGCATCGTGATGACAGGGACATTGGTCGAGAAAGATCTCGAGACCGTGATAGGGAAAAGTCTAGAGACCGCGATCGTGACCGTGATCGTGACCGCGAAAGGGATCGTGAACGAGATCGTGATCGTGACCGGTACAGGGAAGACAGGGACAAATATGCAGATCATCATAGGTACCGTGATCGTGAAGCAGAGCATGATGATGAATGGGAAAGGGGGCGGTCGTCGAGGACACACAGCAAATCACGGTTATCTCAAGAGGAGGAACATCATTCTAGGCCCAGAGATGCTGATTATGGGAAGCGGAGGCGGATGACCTCCGAGTAG 2178 0.522 MEEGEGGDPMDQFHRNEAISAVADEGFLGEEDDDYEDLYNDVNVGEGFLQSLRKNDDLAFRNDDAVQDNSKKPQQEAVAGVSIPGVGGGGEGPGGGGGGGAVDGASRVSGFQNQGFRGNDLGAKQGTGGSGIRVELGQPSGKVSEIEDRSGNGAGVGGGGAAAVQGIGQQPHGGGGGVVGSVGNEGLARQSGGGGVGVAAGGDVNRIGGNGIGNSVGVVNTINTGGPGPGPGPGGPVGAGSAVAPGGGGGGGGTILFVGDLHWWTTDAELEAELCKYGPLKEVKFFDEKASGKSKGYCQVEFFDPAAATACKEGMNGHMFNGRPCVVAYASPFTVKKMGEAQVNRNQQMNQTAAPQGRRGPAEAGAKPAGSNITTGGNYQGGDANRGYGRGNWRGNNPGMGNRGPVNPMRNRGGGMGGRGIMGNGGNGFGQGMGATPPMMHPQSMMNQGFDPAFGGPMGRMGTYGGFPGAPTPPFSGILPSFPGVGGVGLPAPHVNPAFFGRGMPVNGMGMMPGAGMDGPNMGMWSDPNMGGWGGEEPGGGRAGESSYGEEAASDHQYGEASHDRSNWPNSMREKDRGSERDWSGTSERRYRDDRDQGYERDAPREKDVGHDHEWSERRHRDDRDIGRERSRDRDREKSRDRDRDRDRDRERDRERDRDRDRYREDRDKYADHHRYRDREAEHDDEWERGRSSRTHSKSRLSQEEEHHSRPRDADYGKRRRMTSE 725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g00403 725 MobiDBLite consensus disorder prediction 349 406 - -
Arst1g00403 725 MobiDBLite consensus disorder prediction 556 725 - -
Arst1g00403 725 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 256 325 IPR000504 GO:0003723
Arst1g00403 725 PANTHER CLEAVAGE AND POLYADENYLATION SPECIFIC FACTOR 15 664 IPR034772 -
Arst1g00403 725 SMART rrm1_1 255 328 IPR000504 GO:0003723
Arst1g00403 725 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 254 332 IPR000504 GO:0003723
Arst1g00403 725 CDD RRM_CFIm68_CFIm59 256 329 - -
Arst1g00403 725 MobiDBLite consensus disorder prediction 63 182 - -
Arst1g00403 725 Gene3D - 251 364 IPR012677 -
Arst1g00403 725 MobiDBLite consensus disorder prediction 520 725 - -
Arst1g00403 725 SUPERFAMILY RNA-binding domain, RBD 253 346 IPR035979 GO:0003676
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g00403 K14398 - gmx:100813702 859.366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g00403 1 3641598 3644246 Arst1g00403 1 3641598 3644246 ECH