Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g00343 ATGGCTTCAAAGCAGAACATGAAAGAGCTACAATGGGCACTTCAATCACTAAAATCCGACTCCCTAAATCTTGAATGTGTTTCCTTCTACCTTTCCCAACCAACCTCAAACTGTTACCAAGAAACAGAAGCCTCCATAAACATAAACATCTCCAAAGAGAATCTCCCATTGTTCTCTCAAATCTTGACAACACTGGCTGAATCCGGAAGAACCAAATGCACATTGAGGAACCTTGAGTTTCATTCAGTTGTGTGGGAGACAGAAGAGGTAAGAAAACTTGGAACCCTTTTTGGGAACAGTAACAATAATCAAAGCATAAAGCAAGTTTTGTTTAGAAGAAACAGGTTCAATGGGAAAAGCTTCTCAGAGCTTTGTGATATTCTGAAGACAAATTGGGTGATCAAAGAGATTACGTTTTCGGAATCTGGGATTGGAGCAGTTGGAGCTGGACTAATTGCTTCTGCTCTCATGGTGAATCATAGTTTGGAGGAGCTTCAGATTTGGGATGATTCAATTGGTTCAAGGGGTGCTGAAGAGCTTTCAAAGATGATTGAAGTCAATCCAACTCTGAAATTGTTGACCATTTTCGACTCGAATGCCATCACTGCTACTCCTCTTATATCAGCTGTTTTGGCAAGGAACAGAACAATGGAGGTTCATGTTTGGAGTGGTGAAAAGGGGGAAAGAAGTTCAAAGGTTGTTGAGTTTGTTCCTGAGAATAGTACTCTAAGAATTTACAAGCTTAATCTCTCTGGCACTTGCCGCGTCGCCTGCGCTTTAGGAATGAATCTGACAGTGAAATCACTGGATATGACCGGAGTCCGGCTTAAGTCTCGGTGTGCTAAGGAGTTAAGGTGGGTTTTGGAACAAAACCAGACACTTAAAGAGCTCAATTTATCAAGAACTTGTCTTAAAAACAAGGGCATTGTGTATGTTGCGGCTGGACTCTTCAAGAACCGGAGTTTGCAGACATTGCATCTAACAGGAAATTGGTTCGGCGGAGTAGGCGTGGAGCATCTGCTTTGCCCTTTGAGTAGATTTTCAGCCCTGCAAAGGCAAGCCAACATTACTTTGAAGTGTGTTACTTTTGGAGGTGGCAGAACAAAAATAGGTAGGGAAGGTTTAGCCGCTATAATAAAGATGCTAACAACCAACGAGACTCTCCGGCAGCTCGGGATTCATGAGGATGAGAGTTTGAGACCAGATGACTTTGTCAAAATCTTCAAGAGTTTGGAGAAGAATACTAGTTTGAAACTCTTGTCTCTACAAGGCTGCAAAGGTGTTCAAGGAGAGACATTGCTGCAAACAATGATGGAGACACTACAGATAAATCCTTGGATTGAAGACATTGATCTCTCAAGAACACCTTTGCATAATTCTGGAAAGACTCAAGGAATTTATCAAAGATTGGGGCAGAATGAGAAGACTGAACCAGAAATGGATTTGCTCAACAACATGCCGCTAACACAGCCCAAGAGTTGCAGAGTCTTCTTTTGTGGGCAAGAATCTGCAGGTAAGGCAACACTTTGTAATTCAATATCTCATAATTTCTCTGCTTCGGCATTGACCTACTTGGATCAAGTCAGAACAATAGTAAACCCAGTGGAGCAGGCTGTTAAACCAGCAGGGATGAAGATAAAAACTTTCAAGGATGAGGACACAAAGATTTCAGTATGGAATCTTGCTGGGCAGCATGAGTTTTTCTCCCTCCATGATCTTATGTTCCCAGGGCATGGTAGTGCATCATTTTTCCTTGTAATATCTAGTTTATTTAGGAAACCGGGTAACAAAGAACCAAAAAGCATAACAGAGATTGAAGAAGATCTGCAGTATTGGCTCAGGTTCATAGTTTCCAACTCAAAAAGAGCAGTACAACAATGCATGCTACCGAGTGTTGCTGTTGTTCTCACACACTTTGATAAGATCAATCAACCGTCACATAATTTGCAGCATACTGTCAATTCAATTCAGAGACTGAGAGACAAGTTCCATGGCTTTGTTGATTTCTATCCAACAATATTCACAGTTGATGCAAGATCTTCTGCATCTGTCAGTAAACTCACTCATTACATCAGAAAGACAAGCAAGACTATTCTAGAAAGGGTGCCGCGAGTTTATCAACTTTGCAATGATCTGATACAGATTTTATCAGACTGGAGAACTGAGAATTACAACAAGCCAGCAATGAAGTGGAAGGAATTTGGCGAGCTATGCCAAGCGAAAGTGCCGGCTTTGAGAATCCGGTCTAGAAATGATAACAAAGGGAAAGTGGAAACAAGGAGAAGAGCTGTTGCTACTTGCCTTCATCACATTGGTGAGGTGATTTACTTTGAAGAGTTGGGGTTTCTAATATTAGATTGTGAGTGGTTTTGTGGCGAAGCACTTGGTCAGCTTGTAAAGTTAAATGTGAGGAAGCAATACTCCTTAGAAAACAATGGATTTATTAGCAGGAAGGAGCTGGAGAAAATCTTAAGAGGAAGTTTGCAGAGCCCCATTCCTGGTATGGGTTCAAAGGTATCTGAGAACTTAGAGGCTAGTGATCTTGTGAGAATGATGCTGAAACTCGAGTTGTGCTATGAACAAGATCCATCAGATCCAAATTCTCTGCTATTGTTTCCCTCCATTCTTGAAGAAGGAAGAGGGAAGACTCCGAAGTGGCAGCTAAGCACACCGGACTGCCTGTACGCAGGACGTCATCTTGAGTGTGACGATTCTAGTCACATGTTTCTAACTCCAGGATTCTTCCCTCGTTTGCAGGTGCACCTTCACAACAGAGTAAAGACTCTAAATAATCAACATGGAGCAACTTATAGCCTTGAGAAGCACCTCATCTCAATCATCATCAATGGAATTTACATAAGAGTAGAGCTTGGAGGACAATTGGGTTATTATATTGACATCCTTGCATGCTCCACCAAAAACTTGACAGAAACTTTAAGAGTCATTCAGCAGCTTATAATTCCAGCAATCCAAAGCCTTTGCCATGGGATCACCTTGACCGAAAGCATCATAAGGCCCGAATGTGTCCGAAACTTGACACCCCCTAGATACAGAAAAACACAATCTGCTTCCGTGCAGCTACTTAAACAAGCGCTTCTGTCCCTTTCTGCAGACAGCATGTATGATTATCAGCACACATGGAGTCCAGTCTTAGATTCTGGTAGGCCAATCCTCCAAGCTGGTTTTGATTTAGCACGAGACCTTTTATCGGATGATGACTTTCGAGAAGTGTTGCATCGGAGATATCATGACTTATATGATCTCGCTCAAGAATTGCAAGTACCACCTGAAAATAACCCAGAAGGACAAGATCAATCTTTGGCTTTGAGCAATCAAGCTGAAACAGTTGATCCAAGCTTTGGGGGAATTGCAAAAGGAGTTGAAGCAGTCTTACACAGGCTAAAGATTATTGAACAAGAAATCAGAGACTTGAAGCAGGAAATCCAGGGGCTGAGATATTATGAGCATAGGCTCCTCCTCGAACTTCATCGCAAAGTGAACTACCTAGCAACCTACAATGTGCAGGTTGAGGAGAGGAAAGTTCCAAACCTGTTCTATTTTGTTCAAACAGAAAACTATTCTAGAAGGTTGATCACTACCATGCTTTCTGGCATGACCGCACTACGGCTTCACATGTTATGTGAGTTCCGGGGACAAATGCATGTTGTTGAAGATCAGATGGGTTGCGAGATCATGCAAGTTGATAACAGGGCTGTGCAATGTTTGGCTCCATATATGAAGAAATTCATGAAGTTGGTAACTTTAGCGCTAAAGATAGGTGCACATCTTGCGGCCGGAATGGGAGAAATGATACCGGACTTGAGCAAGGAAATGGCTCATTTGGCCGGCTCTTCAGCTTTTGTTGGGGCAGCTGCAGCTGGTGCTGTAGGGGCAGCTGTTCTCGGCCGTAGAAATAGGGCTGCAGAAGGCTCAAGGGACATTCAACAAGATTTAAGAGCAGCACAACAATGGGTGGTTGATTTCTTAAGAGAAAGGAGGTGCTCCACAGGGAAGGACATTGCAGAGAAGTTTGGACTATGGCGAGTTCGGTACAGGGATAATGGTCAGATTGCTTGGATCTGTAGGAGGCACATGTATGCAAGATCTGCAGAGATAGTTGAAGTGCCTGTTTGA 4134 0.4265 MASKQNMKELQWALQSLKSDSLNLECVSFYLSQPTSNCYQETEASININISKENLPLFSQILTTLAESGRTKCTLRNLEFHSVVWETEEVRKLGTLFGNSNNNQSIKQVLFRRNRFNGKSFSELCDILKTNWVIKEITFSESGIGAVGAGLIASALMVNHSLEELQIWDDSIGSRGAEELSKMIEVNPTLKLLTIFDSNAITATPLISAVLARNRTMEVHVWSGEKGERSSKVVEFVPENSTLRIYKLNLSGTCRVACALGMNLTVKSLDMTGVRLKSRCAKELRWVLEQNQTLKELNLSRTCLKNKGIVYVAAGLFKNRSLQTLHLTGNWFGGVGVEHLLCPLSRFSALQRQANITLKCVTFGGGRTKIGREGLAAIIKMLTTNETLRQLGIHEDESLRPDDFVKIFKSLEKNTSLKLLSLQGCKGVQGETLLQTMMETLQINPWIEDIDLSRTPLHNSGKTQGIYQRLGQNEKTEPEMDLLNNMPLTQPKSCRVFFCGQESAGKATLCNSISHNFSASALTYLDQVRTIVNPVEQAVKPAGMKIKTFKDEDTKISVWNLAGQHEFFSLHDLMFPGHGSASFFLVISSLFRKPGNKEPKSITEIEEDLQYWLRFIVSNSKRAVQQCMLPSVAVVLTHFDKINQPSHNLQHTVNSIQRLRDKFHGFVDFYPTIFTVDARSSASVSKLTHYIRKTSKTILERVPRVYQLCNDLIQILSDWRTENYNKPAMKWKEFGELCQAKVPALRIRSRNDNKGKVETRRRAVATCLHHIGEVIYFEELGFLILDCEWFCGEALGQLVKLNVRKQYSLENNGFISRKELEKILRGSLQSPIPGMGSKVSENLEASDLVRMMLKLELCYEQDPSDPNSLLLFPSILEEGRGKTPKWQLSTPDCLYAGRHLECDDSSHMFLTPGFFPRLQVHLHNRVKTLNNQHGATYSLEKHLISIIINGIYIRVELGGQLGYYIDILACSTKNLTETLRVIQQLIIPAIQSLCHGITLTESIIRPECVRNLTPPRYRKTQSASVQLLKQALLSLSADSMYDYQHTWSPVLDSGRPILQAGFDLARDLLSDDDFREVLHRRYHDLYDLAQELQVPPENNPEGQDQSLALSNQAETVDPSFGGIAKGVEAVLHRLKIIEQEIRDLKQEIQGLRYYEHRLLLELHRKVNYLATYNVQVEERKVPNLFYFVQTENYSRRLITTMLSGMTALRLHMLCEFRGQMHVVEDQMGCEIMQVDNRAVQCLAPYMKKFMKLVTLALKIGAHLAAGMGEMIPDLSKEMAHLAGSSAFVGAAAAGAVGAAVLGRRNRAAEGSRDIQQDLRAAQQWVVDFLRERRCSTGKDIAEKFGLWRVRYRDNGQIAWICRRHMYARSAEIVEVPV 1377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g00343 1377 Gene3D - 493 697 IPR027417 -
Arst1g00343 1377 SMART LRR_RI_2 159 186 - -
Arst1g00343 1377 SMART LRR_RI_2 291 318 - -
Arst1g00343 1377 SMART LRR_RI_2 319 346 - -
Arst1g00343 1377 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 480 685 IPR027417 -
Arst1g00343 1377 SUPERFAMILY RNI-like 56 476 - -
Arst1g00343 1377 PANTHER PROTEIN TORNADO 1 1 1376 - -
Arst1g00343 1377 PANTHER PROTEIN TORNADO 1 1 1376 - -
Arst1g00343 1377 Pfam C-terminal of Roc, COR, domain 756 927 IPR032171 -
Arst1g00343 1377 Pfam Leucine Rich repeat 318 340 IPR001611 GO:0005515
Arst1g00343 1377 Pfam Leucine Rich repeat 290 311 IPR001611 GO:0005515
Arst1g00343 1377 Gene3D Ribonuclease Inhibitor 2 210 IPR032675 -
Arst1g00343 1377 Coils Coil 1127 1154 - -
Arst1g00343 1377 Gene3D Ribonuclease Inhibitor 350 486 IPR032675 -
Arst1g00343 1377 Gene3D Ribonuclease Inhibitor 211 349 IPR032675 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g00343 - - gmx:100817598 2333.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g00343 1 3163797 3169542 Arst1g00343 1 3163797 3169542 ECH