Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g00342 ATGGATTCACCACATTCTGTTGTGTCACCATTCAAGAGCTTGGTCTTGAATGAGGGTACTGAGAAGCACAAGCATGATGATGTATTTGAGGTGAATGGAAAAGAGGCTGTGATGTCAAATGGGGATGAAGATTCAATTGGCATGCTTGATGTATATATACACCAAGCTAGGGACATTCAGAACATCTGCATATACCATAAGCAAGATGTTTATGCCAAGATTTGCCTCACTTCTAACCCTGATGACACTGTTTCCACCAAGACCATCAATGGTGGAGGAAGGAACCCAGTGTTCAATGAGAATCTAAGGGTTAGTGTTAGGACTATTGATTCCTCACTCAAATGTGAGATTTGGATGCTTAGCAGGGTCAAGAATTACCTTGAGGACCAGTTGCTTGGTTTTGCTTTGGTGCCTTTGTCTGAGGTACTGCTAGTTCAGGATGGGAAATTGGAGAAAGAGTTCTCTCTTTCTTCAACTGATTTGTTCCATTCTCCGGCCGGTTTTGTTCAGTTGTCGCTTTCTTACACTGGTGCTTCGCCAGATGTTATGGCGATTTCTACAATTCCTAAGGAGGTTGGAGCGCAGGACTCCGAGACGGGTGAGTCGCTGACGAGGGATTTGGAAAAGATTGAGTTCCCTGATCCGAAGATTGTGAATGAAGATCACTTGATGCTCGTGGAAAGCTTCTCTGCTTGCAGTGTTGAGTCTGTTCAGCTTCCTCCCAAGGTTGATTCCCCACCCAGCAGTGTGTCAACAAATGGTGTCACCTCTCCGGTGCCTGCAAGCTCGGAATCATCTGAAGCTGCTGCTGCTAATTCCAAGTCTCCCGGTCAGGAACAAATTTCCAGCACCAAAGATGCTAAACATGTGGATGCTATAGATGGTGAGAGTGATTCCTCAAATGGGGTTCTTCCAAGTGTGTCATTCCCTAAGCCTGTTGTTACTGTGAACCTTGTCCCAGAACCGAATTTGGTGCAGCAGGATATAGTAGACATGTACAACAAAAGCATGCAGCAATTTACTGAGTCATTGGCCAAAATGAAGCTTCCTATGGACATAAAAAGTGAGGCAACTAGTTCAGGGAATTCGAGCACTGAGGAGAAGTTGCAGACACCGAAGAGTAACAACTCGCGCGTATTTTATGGTAGCAGGGCTTTCTTCTGA 1164 0.4519 MDSPHSVVSPFKSLVLNEGTEKHKHDDVFEVNGKEAVMSNGDEDSIGMLDVYIHQARDIQNICIYHKQDVYAKICLTSNPDDTVSTKTINGGGRNPVFNENLRVSVRTIDSSLKCEIWMLSRVKNYLEDQLLGFALVPLSEVLLVQDGKLEKEFSLSSTDLFHSPAGFVQLSLSYTGASPDVMAISTIPKEVGAQDSETGESLTRDLEKIEFPDPKIVNEDHLMLVESFSACSVESVQLPPKVDSPPSSVSTNGVTSPVPASSESSEAAAANSKSPGQEQISSTKDAKHVDAIDGESDSSNGVLPSVSFPKPVVTVNLVPEPNLVQQDIVDMYNKSMQQFTESLAKMKLPMDIKSEATSSGNSSTEEKLQTPKSNNSRVFYGSRAFF 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g00342 387 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 43 178 IPR035892 -
Arst1g00342 387 MobiDBLite consensus disorder prediction 355 376 - -
Arst1g00342 387 PANTHER EXPRESSED PROTEIN 1 387 - -
Arst1g00342 387 MobiDBLite consensus disorder prediction 352 376 - -
Arst1g00342 387 ProSiteProfiles C2 domain profile. 31 154 IPR000008 -
Arst1g00342 387 Pfam C2 domain 48 154 IPR000008 -
Arst1g00342 387 MobiDBLite consensus disorder prediction 242 283 - -
Arst1g00342 387 MobiDBLite consensus disorder prediction 238 304 - -
Arst1g00342 387 Gene3D C2 domain 42 198 IPR035892 -
Arst1g00342 387 SMART C2_3c 48 151 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g00342 Arst-Chr1 3160907 3163404 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g00342 - - gmx:100804602 553.903
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g00342 1 3160907 3163404 Arst1g00342 1 3160907 3163404 ECH
Arst1g00342 1 3160907 3163404 Arst7g00348 7 2273549 2276036 PCT