Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g00307 ATGGCACCCTTTATTCTTTTGGTGCTTGTATCCCTTCTATTAGTTCCAACAAGTTCTTATGTTCAACAAACTAAAGAGGGTTTCATCTCTGGAGTTATATCTGACAAGGGTCTTGATTTTGCAAAGGATATACTAATAGAACAAGGTATTGCCTCCATTGTTCAGCTTCAGCTGCCAGAGATTGAGAAATCTGTTCAAGTCCCTTTCATTGGAAATGCTAAAGTGGTTCTTTCTGAGATTACGATCAAGGATATTCAAGTAAATTCATCTTCTGTTGTGAGTGGAGAGAGTGGAATCTTTCTAGTTGTTTCTGGTGCCACTGCGGATTTGGCTATGAAGTGGAGGTATTCATGTAGCAGTTGGTTAATCCCAATTGGGATTTCGGATAGTGGGAATGCAACTGTGAAGGTTAAAGGTATGCAAGTGGGGCTTTCAGTAGATTTAAGGAATGAAGAAGGAACTCTTAAGTTGATTCTCTTAGATTATGGATGTTATGTTGGAGATTTGTCTATAAAGTTGGAAGGTGGAGCATCTTGGCTGTACCAAGTCTTAGTGGATGCTTTTCAAGGGAACATAGCATCTGCAGTTGAAGATGGAATTTCAGATAAAGTAAGTGAAGGCATAGGGAAGCTTGACACTTTATTGCAGTCTCTTCCAAAGCAAATCTCTGTGGACAACTTTGCAGAGCTAAATGTTTCTTTCGTTGGCAATCCTGTCCTGAGTAGTACTTCAATTGCAATTGCGATTAACGGCTTATTCACAGAGAGAAATGTCGTTTTAGTACCTCAACGTTACCAAAAAAGATTACAGGTTTCTTCTGCATGTGGTGGTTTACCAAAGATGATAAAGGTTTCAATCCATGAAAATGTGTTCAGATCTGCTTCTCTAGTTTACTTCAGGGAAGGTAGTATGCAAATGATTATTGATGAACTACCTAATCAGGCCATTTTGAACACTGCTGAATGGAGATTCATAGTTCCTCAACTATACAAAAAGTATCCGAACGACGACATGCAGCTTAATATATCTGCATCTTCTCCACCAGTGATACTAGTGGATTACCAAGATATCCGTGCGTCTGTTTTAGTAGACATAACGATTGATGTTCTTGAAGCTGGTGAAGTCATACCTGTTGCCTGCATCTCAGTGGATATTAGTGCTTCGTGTTCTGTGGACATTATACGAAACAAAATCAATGGTAGGCTCAAATTGGAAGAGTTTTCTGCATACCTGAAATGGAGCAAAATAGGAAAATTGCACATAAGTCTGATTCAGTCATTAATATCAACGGCTCTGAAAACTGTTGTCATACCGTACCTTAACTTGGAACTGAAGAAAGGATTAGCACTGCCAACCATTGATGGTTTTGCCTTTCAGAATGCAAATATCTTGTACCTTCCTCCATGGATTGCAGTGTGTACTGATGTTTCTTACTTAGAAGACTACTATCTCACTCAGCATTCAGCTCATGTATCATAA 1479 0.3901 MAPFILLVLVSLLLVPTSSYVQQTKEGFISGVISDKGLDFAKDILIEQGIASIVQLQLPEIEKSVQVPFIGNAKVVLSEITIKDIQVNSSSVVSGESGIFLVVSGATADLAMKWRYSCSSWLIPIGISDSGNATVKVKGMQVGLSVDLRNEEGTLKLILLDYGCYVGDLSIKLEGGASWLYQVLVDAFQGNIASAVEDGISDKVSEGIGKLDTLLQSLPKQISVDNFAELNVSFVGNPVLSSTSIAIAINGLFTERNVVLVPQRYQKRLQVSSACGGLPKMIKVSIHENVFRSASLVYFREGSMQMIIDELPNQAILNTAEWRFIVPQLYKKYPNDDMQLNISASSPPVILVDYQDIRASVLVDITIDVLEAGEVIPVACISVDISASCSVDIIRNKINGRLKLEEFSAYLKWSKIGKLHISLIQSLISTALKTVVIPYLNLELKKGLALPTIDGFAFQNANILYLPPWIAVCTDVSYLEDYYLTQHSAHVS 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g00307 492 Pfam LBP / BPI / CETP family, N-terminal domain 37 210 IPR017942 GO:0008289
Arst1g00307 492 PANTHER OS06G0309200 PROTEIN 6 488 IPR045897 -
Arst1g00307 492 Pfam LBP / BPI / CETP family, C-terminal domain 280 478 IPR001124 GO:0008289
Arst1g00307 492 PIRSF Lipid_binding_protein 4 482 IPR030675 GO:0005615|GO:0008289
Arst1g00307 492 Gene3D - 32 463 - -
Arst1g00307 492 SUPERFAMILY Bactericidal permeability-increasing protein, BPI 245 478 IPR017943 GO:0008289
Arst1g00307 492 Gene3D - 36 216 - -
Arst1g00307 492 SMART bpi2_2 276 474 IPR001124 GO:0008289
Arst1g00307 492 SUPERFAMILY Bactericidal permeability-increasing protein, BPI 33 241 IPR017943 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g00307 Arst-Chr1 2845894 2852263 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g00307 K05399 - gmx:100815362 709.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g00307 1 2845894 2852263 Arst1g00307 1 2845894 2852263 ECH
Arst1g00307 1 2845894 2852263 Arst7g00372 7 2357770 2360675 PCT