Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g00250 TCTGCTGATAAACAATCGGGGAACGATTTGAGGAGGCTGCAGCAGCAGCAGCAGGAGGGACAAGAATCTGTTCATAACGAGAACGATTCCAAGCTTCGCAGCGAATTGAAGAATATAAAGTGGAGACCTCCACATATAGGGATAAAGCAGGATTGGCAAGATAAAATTAACAACCTTCGAAAGGCGAGGAAAGAAGTCGAAGATACAGACAAAGTAGGAGATACAAACATGGCTTGTGTTCCATTTTATGATGAAAATCTGTACATCCTAAATATGAAACAATATCAGGAAGCCAAGGCTTCTGAAGCAATTCCAACAGTTGAAGGCTTAACTGTTACAGCAAAGGAACCCATTCCTCCATCATCTGTCCTGAAGCAATTGGCTATAGCAGTTGAGGCCGGAAGGAAAACGAACTCAATGAAAGATTTTCTAGCTTCATCAACAAGTTCTTCACCTGGCAGAGAGAAGGCAGGCTTAAGTTTCTCTGCTGTTAAGGCTTTAGTGATGCGTGAAAAGGAAGACAAACTTACCTCTGAGTTTAGCAGCGATGAGAAAGTTGTGCATTTGATTAAGTCTCTGTTTGATCCAGAGGGAGGGCTCCTTAGCAGGAAAATCAACATGAATCCCGAGGAAACTGCTATAACATCTTTACTAAGAGATATTCATGGTGCTCCTCCTGAAAGCCTAGTTGTTAAGTTGGCAGAAGTTATTGGAAACTTTAAGACCCTCCGAAAAATGGCTCTTTTTTGGTGCAGAGTTGTTGCTGAACTGAAGAAACATTGGTCTGAAGAAAAATATTTACCCGGAGTTCCTCTAGATGACATTCCAGATTTAAACTCATGTCTTCTATATCAGCAATTTCAAGTAATCAATTGTTGCATCTCTCGGAAAATGCGCCATATTATTGCCACCGAATCCCTGGAGTCTATGATGAAAGAGGCCAATTCAAATATTGGAAGATCTGACAAATATACCGACAGAGCTCCCACAAAGCCTTTATTATATGCTAAATTAAGTACTGGGGAGCTTGTTCTTCGACTTGGTGCTCATTGCCCATCTGGAGATCTGACAATGCTAGAAACTGGCGAGCCTGTGTACTCTCCTATCACCCAGGAAGGACCCTTGCTTACAGAAGATCTGATCAAAGAAACTGAGGAGTTTGTGCTGCGGACAGGGAGTGTTGGTGCTGGTTGCTCTCAACTTCTCTCTGATATGCAAGCTTTCAAGGCTGCAAATCCTGGTTGTATTCTGGAAGATTTTGTAAGATGGCACTCTCCACCTGATTGGACAGAAAGTGAGGCAAGTGTCGAGGATAGTGATTTTTTTGAGGGCTGCGAGTCGTTGTCTTCTAGAGGACAGCTAAGTCGGCGAATGCAGAAAGAAGGAAATTTGTGGCGTGAATTGTGGGAAACATCTAAGCCAGTACCAGCCATTAAACAGGCACCTCTCTTTGATGAGGATTTGGCAGTGGAGGGCATACTCGATATATATGAGGACATGCCGCCTTTTGAGCTTTTTGGACAACTGTTTGTTTCATTATTTGGTTTAGGGCTTGCAATAGCAGAAACTATGCTGACTGATAACAGTGACTTTTCAAAGATGTTCAATGACTGCAAGGATTATGTGGTTAGCACTTGTCAAAGCAACAGATGGAGTGAGAAACTTGATGAACTTGTTCAGGTCTATGAAACAGTGGAGATGATGTTAGTGAATCCAGAGGAAGCACTAAAGATGACAAAACAGACAGATGATTCAGTTCTGAGCACTGGTGAACTTAAGAGCCGGTTTAAGAAGCTTAGCCATATCTTTGGTGGGAAAGATAAACCAAAAGATCAGGTAAACACTGATGAAAAGCCGATTCGACAAGCTTTTTCGAATTTCTTCGACAGCAAGTCATCTTTATTTTCAAAGAAGCCCCCAAAACCAGCAAGCCTATCACCTTCCCAGAAATCTTCCTCTCTGGAAAGTGATTGGACATTGGTTTAG 1986 0.4225 MDFKSDRDSADKQSGNDLRRLQQQQQEGQESVHNENDSKLRSELKNIKWRPPHIGIKQDWQDKINNLRKARKEVEDTDKVGDTNMACVPFYDENLYILNMKQYQEAKASEAIPTVEGLTVTAKEPIPPSSVLKQLAIAVEAGRKTNSMKDFLASSTSSSPGREKAGLSFSAVKALVMREKEDKLTSEFSSDEKVVHLIKSLFDPEGGLLSRKINMNPEETAITSLLRDIHGAPPESLVVKLAEVIGNFKTLRKMALFWCRVVAELKKHWSEEKYLPGVPLDDIPDLNSCLLYQQFQVINCCISRKMRHIIATESLESMMKEANSNIGRSDKYTDRAPTKPLLYAKLSTGELVLRLGAHCPSGDLTMLETGEPVYSPITQEGPLLTEDLIKETEEFVLRTGSVGAGCSQLLSDMQAFKAANPGCILEDFVRWHSPPDWTESEASVEDSDFFEGCESLSSRGQLSRRMQKEGNLWRELWETSKPVPAIKQAPLFDEDLAVEGILDIYEDMPPFELFGQLFVSLFGLGLAIAETMLTDNSDFSKMFNDCKDYVVSTCQSNRWSEKLDELVQVYETVEMMLVNPEEALKMTKQTDDSVLSTGELKSRFKKLSHIFGGKDKPKDQVNTDEKPIRQAFSNFFDSKSSLFSKKPPKPASLSPSQKSSSLESDWTLV 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g00250 669 MobiDBLite consensus disorder prediction 1 15 - -
Arst1g00250 669 Coils Coil 57 77 - -
Arst1g00250 669 Pfam Rab3 GTPase-activating protein catalytic subunit 354 505 IPR026147 -
Arst1g00250 669 MobiDBLite consensus disorder prediction 1 46 - -
Arst1g00250 669 MobiDBLite consensus disorder prediction 32 46 - -
Arst1g00250 669 PANTHER RAB3 GTPASE-ACTIVATING PROTEIN CATALYTIC SUBUNIT 100 654 IPR045700 GO:0005096|GO:0043547
Arst1g00250 669 MobiDBLite consensus disorder prediction 16 31 - -
Arst1g00250 669 MobiDBLite consensus disorder prediction 639 669 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g00250 Arst-Chr1 2271377 2278957 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g00250 K18270 - gmx:100818643 929.858
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g00250 1 2271377 2278957 Arst1g00250 1 2271377 2278957 ECH
Arst1g00250 1 2271377 2278957 Arst7g00433 7 2634686 2640438 PCT