Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g00085 ATGGGAGGCTCATATTGTGTGAGGGAGAGGAAGCCATGTCTGAGATGGGTTGAGAAATACTTCAAAGACTGCCTTTGCAATGTGAAAGATGACATCTCCTTCAGTTTCGGTCTCATAAGTCTTGTGTGTTGGGGAGTCGCTGAAATCCCTCAGATTATTACCAATTTTCGCACCAAGTCAAGCCATGGAGTCTCCCTTGCCTTTCTCTTCACTTGGGTTGCCGGTGACATATTCAACTTGGTGGGTTGCCTTTTGGAACCAGCTACGCTTTATACAATCACTACGATCGTATTGGTACTGCAAAGCTTATACTATGACCACCTTTACAAATGGCGCAAACGTCGGCACAGGCTCAACAACAGAGGAGTTGATCACGAAGAAGACAAAAAACCATTGAAACCGAAACCAAGTCATGAATCTGGAATTCCAATACCAAATGGCACACCCAAAGCAGCACCTCGACGGGAATATTACTATACGTCAGCAAGATCGCTAGCTGGGAGTGGCACTCCACCCTTCCGTACATACATGAGAGCTGTTAAAAGTGGCCCTTCAGCAATGGAATTGAACTGTGATTCTTCTTCGGACGATGAGGCATCGTCGTCTCCGGCGATTCCCTCTTCCACCCAACCTCGGCCCATCCCACGTTCCGCAGCTGGATATGGGACATTTCTCGCTGCATCTGTTAACCTGCCTCTGAAGGGTAATGCTCTGAGAGAAGGATACATAAGATTCAATGGACGAAAACTTCTGCAGGAGCAACAGGTACACAGTGCACTTGGTCAATGGTTGGGATGGCTCATGGCTGCTATATATATGGGAGGTCGCCTACCACAAATATGGTTGAACATTAAACGAGGCAGTGTAGAGGGCTTAAATCCTTTCATGTTCGTGTTTGCACTAATTGCTAATGCTACTTATGTTGGAAGTATTCTTGTACGAACTACAGAATGGGATAGCATCAAACCTAATATGCCATGGTTGCTGGATGCTGTAGTTTGCGTGGCACTGGACCTTTTTATAATACTACAGTACATCTACTATAAATACTTCAGGAGGAGAGCACCAAGTTGTGATGGAGACTACTACGAAGACGCCAGAAAAAGCTGA 1110 0.4577 MGGSYCVRERKPCLRWVEKYFKDCLCNVKDDISFSFGLISLVCWGVAEIPQIITNFRTKSSHGVSLAFLFTWVAGDIFNLVGCLLEPATLPTQFYTALLYTITTIVLVLQSLYYDHLYKWRKRRHRLNNRGVDHEEDKKPLKPKPSHESGIPIPNGTPKAAPRREYYYTSARSLAGSGTPPFRTYMRAVKSGPSAMELNCDSSSDDEASSSPAIPSSTQPRPIPRSAAGYGTFLAASVNLPLKGNALREGYIRFNGRKLLQEQQVHSALGQWLGWLMAAIYMGGRLPQIWLNIKRGSVEGLNPFMFVFALIANATYVGSILVRTTEWDSIKPNMPWLLDAVVCVALDLFIILQYIYYKYFRRRAPSCDGDYYEDARKS 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g00085 378 SMART ctns 283 314 IPR006603 -
Arst1g00085 378 SMART ctns 46 77 IPR006603 -
Arst1g00085 378 FunFam PQ-loop repeat family protein / transmembrane family protein 32 128 - -
Arst1g00085 378 Pfam PQ loop repeat 32 88 IPR006603 -
Arst1g00085 378 Pfam PQ loop repeat 269 327 IPR006603 -
Arst1g00085 378 Gene3D - 270 366 - -
Arst1g00085 378 Gene3D - 34 127 - -
Arst1g00085 378 PANTHER SEVEN TRANSMEMBRANE PROTEIN 1-RELATED 5 360 - -
Arst1g00085 378 FunFam Vacuolar membrane PQ loop repeat protein 269 366 - -
Arst1g00085 378 MobiDBLite consensus disorder prediction 131 145 - -
Arst1g00085 378 MobiDBLite consensus disorder prediction 196 223 - -
Arst1g00085 378 MobiDBLite consensus disorder prediction 131 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g00085 Arst-Chr1 868045 878650 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g00085 K23678 - qsa:O6P43_024720 558.525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g00085 1 868045 878650 Arst1g00085 1 868045 878650 ECH
Arst5g00949 5 9026743 9029489 Arst1g00085 1 868045 878650 PCT