Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g00021 ATGGCGCAGCGGTGGCGCTCCGCCGCCGGTCACCTCAGAACGGTGGCGGCGGCTACCCGTCGGGGACCATCATCATTCCAGAGTTCTTGTTACCACACCATCCAAGCGATCCCGAGAGAGTTCACCGGCAGCAGAGTCTCTGCAAGGGAAAGAACGCAAGGTCGAATCCCTGCCGTGGTTTTCTTCCAGAACCTTCTAGAAAAGGATCCTACAATTCGGCCTTCATTTTCGTCGAAGAAGCATTTGGTCACCGTTGAGAGGAAGCAAATTAAGACCATACTCAAATCCCCTGACGACGCCTTTTCCTTTTGCTCCACACGTTTTCCTCTGCAGATCCGTGCTGGCTCAGGATCCTCCCATTTGCTTGAATCCGGAACTGTTCTTCCCATCAAGATTCACAGGGACGAGGAGAGTGGGAAGGTTCTGAATCTGGTGTTTGTTTGGGCTGAAGATGGGATGAATTTGAAGGTTGATGTTCCGGTTGTGTTCAAAGGCGAAGATGTTTGTCTTGGTGTTCAGAAAGGGGGGATGTTAAATAAGATCAGAACTAGCGTAAAATATCTCTGTCCATCAGAGCACATTCCTTCGAAAATTGAGGTGGACGTGAGTAATCTTGATATTGAAGATAAGATATTCATCCGCGATATTGAGGTTCATCCATCCTTGAAGCTTCTGAGCAAGAATGAAAACATGCCCATATGTAAAGTAGTTCCAACAAGTTTGGGACACCAAGCAAAGGAGGATCAATGA 750 0.48 MAQRWRSAAGHLRTVAAATRRGPSSFQSSCYHTIQAIPREFTGSRVSARERTQGRIPAVVFFQNLLEKDPTIRPSFSSKKHLVTVERKQIKTILKSPDDAFSFCSTRFPLQIRAGSGSSHLLESGTVLPIKIHRDEESGKVLNLVFVWAEDGMNLKVDVPVVFKGEDVCLGVQKGGMLNKIRTSVKYLCPSEHIPSKIEVDVSNLDIEDKIFIRDIEVHPSLKLLSKNENMPICKVVPTSLGHQAKEDQ 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g00021 249 PANTHER RIBOSOMAL PROTEIN L25/GLN-TRNA SYNTHETASE, ANTI-CODON-BINDING DOMAIN-CONTAINING PROTEIN 27 239 - -
Arst1g00021 249 CDD Ribosomal_L25_TL5_CTC 33 146 IPR029751 GO:0003735|GO:0005840|GO:0006412|GO:0008097
Arst1g00021 249 FunFam Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain-containing protein 152 239 - -
Arst1g00021 249 Gene3D Ribosomal protein L25, beta domain 153 231 IPR037121 -
Arst1g00021 249 Pfam Ribosomal protein TL5, C-terminal domain 155 239 IPR020057 -
Arst1g00021 249 SUPERFAMILY Ribosomal protein L25-like 32 242 IPR011035 GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g00021 Arst-Chr1 341864 345215 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g00021 K02897 - gmx:100802599 380.948
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g00021 1 341864 345215 Arst1g00021 1 341864 345215 ECH