Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g03581 ATGCTCAAGTATACTCACCCATTCTTCAACTTCTTGATTTCTAATATAATGAACAATCTTTTATATCTCTCGCTTTTAGCGGGAGCCGCGGCTTCCGCTTATTACTACGGTTCTGGCGAAGAGTCGCTGAACCGTAGTAAGCATTCTTTAATAACTTCGTTTTGTTTAGCGGCAGCTTTCACGTACCACTATCTTGTGAGGAGAACAAGATATGTTTTTTTGGTAGACTTCGCGTGCTTCAAACCAGGCCTCTCTTGTCTTTGCACCACCGAGATGATTCTAGAACGTGCCAAGCACGTGGGTTTTCTCTCAGAAGAGAGCCTCAAGTTGGTTGCAAAGATTTTAGACAGGTCTGGTTTGGGGCCGAAGACGTATCTACCGGAGGGAGTGTTGCATATTCCACCGAAGCTCACTTTTGATGAAGCGAGGAAGGAAACTGATACGGTGCTTTTTGGAGCTGTTGATGAGTTGCTTGAGAAAACTGGTGTTCAGAGTAAGGACATTGGGATTCTTGTTGTGAATTGTTGTTTGTTCAATCCTACTCCTTCTTTGTCAGACACCATTGTTAATCACTACAAGCTTAGAGGAAATATTCTCACCTATGATCTCAGTGGTATGGGGTGCAGTGCTGGTGTTCTTGCTGTGGATTTTGCCAAACAACTCCTTCAGGTACATCCAAATTCATATGCATTGGTGCTGAGTACAGAAAATGAAACTTCAAGCATTTACAGAGGCAACAACCCTTCAATGATGCTAACCAACTGCCTCTTCCGAATGGGTGGCTCGGCAGCTCTGCTCTCCAGCCACCCATCGGATCGCTGCCGTTCAAAATACCAGCTGATCCACACGCTTCGCACGCACGTCGGCGCCGACGACAACAGCTACAAATGTGTGTTTCAGGAAGAAGACGAGGCTCATAAAATCGGCGTTTCTCTGTCGAAAGAACTCATGAATGTGGCCAGGGACGCTCTCAAGATCCACATCACCTCCCTCGGTCCGGTTGTTCTCCCGATCTCGGAGAAAGTCAAGTTCGTCGTCAACTTCGTTAAACGCAAGTTTCTCAAGATCATGATTGAGGCTTACGTCCCTAATTTCACGTTAGCTTTCGACCATTTTTGCATCCACACAGGTGGGAGAGCTGTTCTTGATAGGATGCAAAAGAGTCTTGAGCTTGATGATTGGCACATGGAACCTTCTAGAATGACACTTTACAGGTTTGGGAACACATCATCAAGCTCTGTATGGTATGAATTGGCATACTGTGAGGCCAAAGGAAGAGTGAAGAAAGGTGACAGGGTTTGGCAAATGGCATTTGGATCTGGATTCAAGGTAAACACTGCTGTTTGGGTTGCATTGAAGAATATTGAACCACCTTTGAAGAATACTCCTTGGAGGGATGAAATTGATGATTTTCCAGTCAAACTCAATCCACCAAAGCCCACTAGTAATAACAAATAA 1458 0.4492 MLKYTHPFFNFLISNIMNNLLYLSLLAGAAASAYYYGSGEESLNRSKHSLITSFCLAAAFTYHYLVRRTRYVFLVDFACFKPGLSCLCTTEMILERAKHVGFLSEESLKLVAKILDRSGLGPKTYLPEGVLHIPPKLTFDEARKETDTVLFGAVDELLEKTGVQSKDIGILVVNCCLFNPTPSLSDTIVNHYKLRGNILTYDLSGMGCSAGVLAVDFAKQLLQVHPNSYALVLSTENETSSIYRGNNPSMMLTNCLFRMGGSAALLSSHPSDRCRSKYQLIHTLRTHVGADDNSYKCVFQEEDEAHKIGVSLSKELMNVARDALKIHITSLGPVVLPISEKVKFVVNFVKRKFLKIMIEAYVPNFTLAFDHFCIHTGGRAVLDRMQKSLELDDWHMEPSRMTLYRFGNTSSSSVWYELAYCEAKGRVKKGDRVWQMAFGSGFKVNTAVWVALKNIEPPLKNTPWRDEIDDFPVKLNPPKPTSNNK 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g03581 485 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 369 449 IPR013747 -
Arst10g03581 485 CDD CHS_like 48 449 - -
Arst10g03581 485 Pfam FAE1/Type III polyketide synthase-like protein 64 352 IPR013601 GO:0006633|GO:0016020|GO:0016747
Arst10g03581 485 SUPERFAMILY Thiolase-like 61 275 IPR016039 GO:0016746
Arst10g03581 485 PIRSF Very_long_ch_3-ktacl-CoA_syn 3 485 IPR012392 GO:0006633|GO:0016020|GO:0016747
Arst10g03581 485 PANTHER 3-KETOACYL-COA SYNTHASE 50 474 IPR012392 GO:0006633|GO:0016020|GO:0016747
Arst10g03581 485 SUPERFAMILY Thiolase-like 257 450 IPR016039 GO:0016746
Arst10g03581 485 Gene3D - 112 450 IPR016039 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g03581 Arst-Chr10 103665149 103670573 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g03581 2 484 Miscellaneous Gene Families AT1G04220 56.680 0.0 569
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g03581 K15397 - gmx:100791995 717.227
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst10g03581 10 103665149 103670573 Arst10g03581 10 103665149 103670573 ECH