Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g03564 ATGGGGAGGAAATGGTTTGAGAGATGGGTTATGGTAGAAGCAGTTGTTGAAGTGATTAGTATAATTATTATGATGAGTTGGTGTGTGGAAGGGGTTGGAGTGAATTGGGGAACACAAGCTACACAGCAATTGAGAGCAGACACAGTGGTGCAGATGATGAAGGACAATGGAATAGAGAAAGTGAAACTGTTTGATGCAGATGGAAGAATCATGAGTGCACTTGCTGGGTCTGGGATTGAAGTTATGGTTGCCATTCCCAATGACCAGCTTGCTGCCATGACTAGCTATGATCGAGCTGTTCAGTGGGTCAGAAAGAATGTTACCAGTTACAACTTCAAGGGTGGAGTTAACATCAAATATGTAGCAGTTGGGAACGAACCATTCTTGAAATCATACAACAATTCATTCTTGAATGTGACCATGCCTGCCCTACAAAATTTTAGGCCTGACATATCAGATCTCATGACACAAATAGTGCAATTCTTGCACAACAACAATGCACCATTCACCGTTAACATCTACCCATTCTTGAGTCTCTATGGCAATGATGATTTCCCTTTTGACTATGCCTTCTTTGATGGGGTATCCAACCCCATAAACGACAATGGGGTTCTTTACACCAATGTCTTTGATGCAAATTTTGACACTTTGGTTTCTGCTCTCAAAGGGGTTGGGTATGGTGACATGGCAATCTTGGTTGGAGAAGTAGGGTGGCCCACAGATGGAGACAAGAATGCCAACGTGGCCAATGCTGTAAGGTTCTATAATGGACTTCTTCCAAGGATTTCATCAAGTAAAGGTACACCTCTAAGACCAGGGCACCTTCAAGTTTATCTCTTTGGCCTTATTGATGAGGATGCTAAGAGCATTGCTCCTGGCAACTTTGAGCGTCATTGGGGAATATTCCGGTATGATGGACAACCTAAGTTCCCAATGGATCTTTCTGGTCAAGGTCAAAACAAAATATTAGTGGGTGCTAAGAATGTGATTTACTTGGACCCAAAATGGTGCATGTTCAATCCAGATGCCACGGATCTTAGCAAACTAGCTGATAATATAAACTATGCTTGCACATTTGCGGATTGCACTGCATTAGGATATGGTTCTTCATGCAACAATCTTGATGCTAATGGGAATGCCTCATATGCATTTAATATGTACTACCAAGCGCAAAATCAGAATGACATGGCTTGCAATTTTGAAGGCTTAGCCCAAATTACTATGAAGAATATTTCTACTCCCACTTGCGACTTTATTATTCAGATAAACCCTTCATCATCTTCTTCTTTGACACCCTCATCAGCAGTAGCTTTCTTATTTATTGCATTAGCCATGATTCTATTTTTTTAG 1350 0.4119 MGRKWFERWVMVEAVVEVISIIIMMSWCVEGVGVNWGTQATQQLRADTVVQMMKDNGIEKVKLFDADGRIMSALAGSGIEVMVAIPNDQLAAMTSYDRAVQWVRKNVTSYNFKGGVNIKYVAVGNEPFLKSYNNSFLNVTMPALQNXFRPDISDLMTQIVQFLHNNNAPFTVNIYPFLSLYGNDDFPFDYAFFDGVSNPINDNGVLYTNVFDANFDTLVSALKGVGYGDMAILVGEVGWPTDGDKNANVANAVRFYNGLLPRISSSKGTPLRPGHLQVYLFGLIDEDAKSIAPGNFERHWGIFRYDGQPKFPMDLSGQGQNKILVGAKNVIYLDPKWCMFNPDATDLSKLADNINYACTFADCTALGYGSSCNNLDANGNASYAFNMYYQAQNQNDMACNFEGLAQITMKNISTPTCDFIIQINPSSSSSLTPSSAVAFLFIALAMILFF 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g03564 450 SMART X8_cls 336 419 IPR012946 -
Arst10g03564 450 Pfam Glycosyl hydrolases family 17 133 314 IPR000490 GO:0004553|GO:0005975
Arst10g03564 450 ProSitePatterns Glycosyl hydrolases family 17 signature. 230 243 IPR000490 GO:0004553|GO:0005975
Arst10g03564 450 FunFam Glucan endo-1,3-beta-glucosidase 8 332 428 - -
Arst10g03564 450 SUPERFAMILY (Trans)glycosidases 32 314 IPR017853 -
Arst10g03564 450 Gene3D - 333 430 - -
Arst10g03564 450 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 147 408 IPR044965 GO:0004553|GO:0005975
Arst10g03564 450 Pfam X8 domain 336 405 IPR012946 -
Arst10g03564 450 Gene3D Glycosidases 30 146 - -
Arst10g03564 450 Gene3D Glycosidases 147 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g03564 Arst-Chr10 103523609 103526173 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g03564 11 423 Miscellaneous Gene Families AT1G64760 66.000 0.0 602
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g03564 - - adu:107471737 874.774
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst10g03564 10 103523609 103526173 Arst10g03564 10 103523609 103526173 ECH
Arst10g03564 10 103523609 103526173 Arst10g03564 10 103523609 103526173 PCT