Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g03563 ATGGCTTCACCAGCACAGGGACAGGGCGGTACTACTTTTTCTTCCACACAAACCCAAACTCTTCCACTGCAAGACAGGGTGGCTATAGTGACTGGCTCCTCACGTGGAATCGGTCGTCAAATCGCCCTCCACCTCTCTTCACTCGGAGCCCGACTCGTACTCAACTACTCCTCTTCCAACTCCTCCCCAGCCGACTCACTCGCCGCCCAAATCAACGCTACCTCCGCCTCCTCTGCGCTCCCGCAAGCCATCGTAGTCCGCGCTGACATCTCCGACCCCACTCAGGTCCGGCACCTCTTCGACTCCGCCGAGAACGCCTTCAACTCGCCGGTTCACATCCTCGTCAACTCCGCCGGAACCCTAGATCCCAAGCAGCCCTCCATCGCCGACACCTCCGACGAGAGCTTCGACCATGTCTTCGCCGTGAACGCCAGGGGCGCCTTCCTGTGCGCGCGGGAGGCGGCGAACCGGCTGAAGCGCGGCGGCGGGGGGCGGATCATACTGTTGTCTTCGTCGCAGGTGGCGGCACTAAGGCCGGGGTTCGGCGCGTACACGGCGTCAAAGGCGGCAGTGGAGGCGATGACGAAGATCCTGGCGAAGGAGCTGAAGGGGACGGGGATCACCGCGAATTGCGTGACGCCGGGGCCGATCACGACGGAGTTGTTCTTCAGTAGCAGGACGGAGGAGCAGGTTCAGAAGCTGATTGAGGAGTCGCCGATGCAGAGACTTGGGGAGACCAAGGATGTGGCTCCTCTGGTTGGGTTTCTTGCCTCTGATGCTGGCGAATGGGTCAACGGTCAGGTTATTCGAGTCAACGGCGGTTACGTGTAA 831 0.6125 MASPAQGQGGTTFSSTQTQTLPLQDRVAIVTGSSRGIGRQIALHLSSLGARLVLNYSSSNSSPADSLAAQINATSASSALPQAIVVRADISDPTQVRHLFDSAENAFNSPVHILVNSAGTLDPKQPSIADTSDESFDHVFAVNARGAFLCAREAANRLKRGGGGRIILLSSSQVAALRPGFGAYTASKAAVEAMTKILAKELKGTGITANCVTPGPITTELFFSSRTEEQVQKLIEESPMQRLGETKDVAPLVGFLASDAGEWVNGQVIRVNGGYV 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g03563 276 PRINTS Glucose/ribitol dehydrogenase family signature 205 222 IPR002347 -
Arst10g03563 276 PRINTS Glucose/ribitol dehydrogenase family signature 239 259 IPR002347 -
Arst10g03563 276 PRINTS Glucose/ribitol dehydrogenase family signature 109 120 IPR002347 -
Arst10g03563 276 PRINTS Glucose/ribitol dehydrogenase family signature 158 174 IPR002347 -
Arst10g03563 276 PRINTS Glucose/ribitol dehydrogenase family signature 184 203 IPR002347 -
Arst10g03563 276 PRINTS Glucose/ribitol dehydrogenase family signature 27 44 IPR002347 -
Arst10g03563 276 Gene3D - 5 275 - -
Arst10g03563 276 SMART This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 26 215 - -
Arst10g03563 276 PANTHER NADPH-DEPENDENT ALDEHYDE REDUCTASE-LIKE PROTEIN, CHLOROPLASTIC-RELATED 15 274 - -
Arst10g03563 276 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 24 275 IPR036291 -
Arst10g03563 276 Pfam Enoyl-(Acyl carrier protein) reductase 32 275 - -
Arst10g03563 276 FunFam Short-chain dehydrogenase reductase 14 276 - -
Arst10g03563 276 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 109 120 IPR002347 -
Arst10g03563 276 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 164 172 IPR002347 -
Arst10g03563 276 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 184 203 IPR002347 -
Arst10g03563 276 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 171 199 IPR020904 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g03563 Arst-Chr10 103521744 103522761 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g03563 23 274 Miscellaneous Gene Families AT2G29290 34.252 1.01e-30 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g03563 K00059 - gmx:100809416 386.726
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst10g03563 10 103521744 103522761 Arst10g03563 10 103521744 103522761 ECH