Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g03544 ATGGCGAAATTTCTGAATCTTTTGGTGGGACTTATGCTTTTGACATGTTGTGTGTCAATAACAGAGGCAGAGTATTTGAAATACAAAGATCCAAAACAGCCATTAAATATTCGAATCAAGGATCTTATGAAAAGGATGACTTTGGAAGAGAAAATTGGCCAAATGGTGCAGATCGAACGCACCGTTGCTTCTGCTGATGTCATCAAGAACTATTTCATTGGGAGTGTGTTGAGTGGAGGTGGAAGTGTTCCAAAAATAAATGCAACTGCTGTGGATTGGGTTGACATGGTGAATGAGCTTCAAAAGGGTGCTTTATCAACAAGGCTGGGAATTCCTTTAATTTATGGAATTGATGCTGTTCATGGCCATAACAATGTTTATAAAGCAACGATTTTTCCTCACAATGTTGGGCTAGGAGCTACCAGGACTGCTCTTGAAGTTAGAGCTACCGGGATTCCATATGCGTTCGCACCTTGCATTGCGGTGTGTAGGGATCCAAGGTGGGGAAGGTGTTATGAAAGTTATAGCGAAGATCATAGGATAGTCCAAGCTATGACAGAGATCATCCCTGGATTGCAGGGTGAAATCCCTGCAAACTCTCCCAAGGGTGTTCCCTATGTTGCTCCTGGAAAAACAAAAGTTGCAGCTTGTGCTAAACACTTTGTTGGTGATGGAGGAACTGTAAAAGGAATCAATGAGAACAACACAGTGATAGATAGACATGGATTGCTTAGCATTCACATGCCAGCTTATGATAACTCAATTATTAAGGGTGTGGCAACTGTCATGGTCTCTTACTCAAGCCTCAATGGAGTTAAGATGCATGCTAACCGTGATTTAGTCACTGGTTTCCTCAAGAAGACACTTCGTTTCAGGGGTTTTGTGATATCTGATTATCAAGGCATTGATAGGATTACTTACCCTCCTCATGCTAACTACACATATTCTGTTCTAGCTGGAGTAAATGCTGGAATTGACATGGTCATGATTCCATTTACTTACAAGGAATTCATAGATGACTTAACTTCTTTGGTGAAAAATAATTTTGTGCCCATGAGTAGAATTAACGATGCAGTGAAGAGAATTTTAAGGGTCAAGTTTGTGATGGGTCTTTTTGAGAATCCACTTGCTGATTACAGCCTCGTCAACCAGATTGGAACTCAGGAGCATAGAGAATTGGCTAGGGAAGCTGTGAGAAAATCTCTGGTGCTGTTGAAGAATGGTGAAGATGGTGATAAGCCATTGATTCCTCTTCCTAAGAAAGCATCAAAGATTCTTGTTGCTGGAAGCCACGCTGATAATCTTGGCTTTCAATGTGGTGGTTGGACCATTACTTGGCAAGGACAAGGTGGCAACAACATTACTAAAGGTACAACAATTCTTAGTGCTATTAAAAACACTGTTGATAAAGACACAAAGGTAGTTCACAAGGAGAACCCAGATCTAGAATATGTGAAGTCAAATAATTTCTCATATGCCATTGTTGTGGTTGGAGAGGAGCCATATGCAGAAACAAAGGGTGACAGCAAGAACTTAACAATCTCTCACAATGGATATGACACTATAAAGAATGTGTGTGGAGGAATCAAATGTGTTGTTGTAGTAATCTCTGGTCGCCCATTGGTTATGCAACCATATGTTGAGAGCATTGATGCACTTGTTGCTGCATGGCTTCCAGGAACAGAGGGACAAGGTGTTGCTGATGTTCTGTTTGGTGATTATGGTTTCACTGGCAAGCTTCCAAGAACATGGTTCAAGACTGTTGATCAGTTACCTATGAATGTTGGTGATTCTCATTATGATCCTCTCTTCCCCTTTGGATTTGGCCTCACTACCAAACCAGTTAATTAA 1851 0.4095 MAKFLNLLVGLMLLTCCVSITEAEYLKYKDPKQPLNIRIKDLMKRMTLEEKIGQMVQIERTVASADVIKNYFIGSVLSGGGSVPKINATAVDWVDMVNELQKGALSTRLGIPLIYGIDAVHGHNNVYKATIFPHNVGLGATRTALEVRATGIPYAFAPCIAVCRDPRWGRCYESYSEDHRIVQAMTEIIPGLQGEIPANSPKGVPYVAPGKTKVAACAKHFVGDGGTVKGINENNTVIDRHGLLSIHMPAYDNSIIKGVATVMVSYSSLNGVKMHANRDLVTGFLKKTLRFRGFVISDYQGIDRITYPPHANYTYSVLAGVNAGIDMVMIPFTYKEFIDDLTSLVKNNFVPMSRINDAVKRILRVKFVMGLFENPLADYSLVNQIGTQEHRELAREAVRKSLVLLKNGEDGDKPLIPLPKKASKILVAGSHADNLGFQCGGWTITWQGQGGNNITKGTTILSAIKNTVDKDTKVVHKENPDLEYVKSNNFSYAIVVVGEEPYAETKGDSKNLTISHNGYDTIKNVCGGIKCVVVVISGRPLVMQPYVESIDALVAAWLPGTEGQGVADVLFGDYGFTGKLPRTWFKTVDQLPMNVGDSHYDPLFPFGFGLTTKPVN 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g03544 616 PANTHER PERIPLASMIC BETA-GLUCOSIDASE-RELATED 23 614 - -
Arst10g03544 616 PANTHER PERIPLASMIC BETA-GLUCOSIDASE-RELATED 23 614 - -
Arst10g03544 616 Pfam Glycosyl hydrolase family 3 N terminal domain 47 365 IPR001764 GO:0004553|GO:0005975
Arst10g03544 616 Pfam Glycosyl hydrolase family 3 C-terminal domain 402 611 IPR002772 GO:0004553|GO:0005975
Arst10g03544 616 Gene3D - 387 613 IPR036881 GO:0004553|GO:0005975
Arst10g03544 616 PRINTS Glycosyl hydrolase family 3 signature 284 302 IPR001764 GO:0004553|GO:0005975
Arst10g03544 616 PRINTS Glycosyl hydrolase family 3 signature 108 124 IPR001764 GO:0004553|GO:0005975
Arst10g03544 616 PRINTS Glycosyl hydrolase family 3 signature 132 151 IPR001764 GO:0004553|GO:0005975
Arst10g03544 616 PRINTS Glycosyl hydrolase family 3 signature 214 230 IPR001764 GO:0004553|GO:0005975
Arst10g03544 616 SUPERFAMILY (Trans)glycosidases 26 401 IPR017853 -
Arst10g03544 616 Gene3D - 21 386 IPR036962 GO:0004553|GO:0005975
Arst10g03544 616 FunFam Beta-D-glucan exohydrolase isoenzyme ExoI 21 386 - -
Arst10g03544 616 FunFam Glycosyl hydrolase family protein 387 613 - -
Arst10g03544 616 SUPERFAMILY Beta-D-glucan exohydrolase, C-terminal domain 402 611 IPR036881 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g03544 Arst-Chr10 103434397 103437696 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g03544 5 614 Glycoside Hydrolase AT5G20950 73.430 0.0 915
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g03544 K05349 - gmx:100819414 1005.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst10g03544 10 103434397 103437696 Arst10g03544 10 103434397 103437696 ECH