Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g03543 ATGGCGAAAATTCCCATCTTTATGGTGGGTTTATTGCTGTTGAACTGCTGGGTAGCCTTGGCAGATGCAGAGTACTTGAAATATAAAGATCCAAAACAGCCTTTGAATGTTCGAATCAAGGATCTCATAAACAGAATGACTTTGGAGGAGAAGATTGGCCAAATGGTGCAGATTGATCGCACTGTTGCATCAGCTAATGCCATTAACAAGTACTTTATAGGGAGTGTGCTAAGTGGGGGAGGAAGTGTTCCAAAGAAGGAGGCTAGTGCAGAGGATTGGATTAACATGGTGAATGATTTTCAAAAAGGTGCCTTATCAACCAGGCTGGGAATTCCTATGATTTATGGAATTGATGCTGTTCATGGCCATAACAATGTCTACAAAGCAACCATTTTTCCTCACAACATTGGGATGGGAGCTACTAGGGACCCAGAACTTGTGAAGAAGATTGGAGAAGCAACTGCACTTGAAGTTAGAGCTACCGGAATTCCATATGTGTTTGCACCTTGCATTGCGGTTTGTAGAGATCCAAGGTGGGGTCGCTGCTATGAAAGTTATAGTGAAGATCCTACACTAGTCCAAGCTATGACAGAGATCATTCCCGGATTGCAAGGTCAAATCCCTGCAAATTCACGAAAGGGTGTTCCCTTTGTTGCTGGAAAAAAGAATGTAGCAGCTTGTGCTAAACACTATGTCGGAGATGGAGGAACCACAAAAGGAATCAATGAGAACAACACAGTGATAGATAGACATGGATTGCTTAGCATTCACATGCCAGGCTACTATAACTCAATCATCAAGGGAGTGTCTACTGTCATGGTTTCTTTCTCGAGCTGGAATGGAGTTAAGATGCACGCTAACCGTGAACTAGTCACTGGCTTCCTCAAGAACACACTTCGTTTCAGGGGTTTTGTTATATCAGATTGGCAGGGAATTGATAGGATTACTTCCCCTCCTCATGCCAACTATACATATTCCATTCTTACCGGAATTACTACTGGAATTGACATGATAATGGTTCCTTTCAACTACACAGAATTCATAGATAGCCTAACCTCTCTAGTGAAACATAATTTCATACCCACGAGTCGAATTGATGATGCAGTGAGGAGAATTTTAAGGGTTAAGTTCATGATGGGCCTTTTTGAGAATCCACTTGCTGATTACAGCTTAGTCAACCAACTTGGGAGACAGGAGCATAGAGACTTAGCTAGAGAAGCTGTAAGGAGATCATTAGTCTTGTTAAAGAATGGTCAATATGCACATAAACCATTGCTTCCTCTTCCTAAGAAGGCTTCAAAAATACTTGTTGCCGGAAGCCATGCTGATAATCTCGGTTATCAGTGTGGTGGTTGGACCATTGATTGGCAAGGACTAAGTGGAAACAATCTTACCACTGGCACAACTATTCTAAGTGCTATAAAAAACACTGTTGATAAAGACACTATGGTGGTTTACAAGGAGAACCCTGATTTGGAGTATGTGAAGTCCAATGATTTTTCATATGCAATTGTGGTAGTTGGAGAGCATCCCTATGCAGAGACTTTTGGAGACAGCTTGAACTTGACAATACCAGATCCTGGTCCACAAACCATAACAAATGTGTGTGGAGGACTGAAATGTGTTGTTGTAGTAATCTCTGGTCGCCCTGTGGTTATACAGCCATATCTTGACACCATTGAAGCACTTGTTGCTGCTTGGCTTCCAGGAACTGAGGGTCAAGGTGTTGCTGATGTCTTGTTTGGTGATTATGGTTTCACTGGCAAGCTTCCAAGAACATGGTTCAAGACTGTTGATCAGTTACCTATGAATGTTGGTGATTCTCATTATGATCCACTTTATCCATTTGGATTTGGCCTTACAACCAAACCCAACAAAGTAGAATAA 1887 0.4187 MAKIPIFMVGLLLLNCWVALADAEYLKYKDPKQPLNVRIKDLINRMTLEEKIGQMVQIDRTVASANAINKYFIGSVLSGGGSVPKKEASAEDWINMVNDFQKGALSTRLGIPMIYGIDAVHGHNNVYKATIFPHNIGMGATRDPELVKKIGEATALEVRATGIPYVFAPCIAVCRDPRWGRCYESYSEDPTLVQAMTEIIPGLQGQIPANSRKGVPFVAGKKNVAACAKHYVGDGGTTKGINENNTVIDRHGLLSIHMPGYYNSIIKGVSTVMVSFSSWNGVKMHANRELVTGFLKNTLRFRGFVISDWQGIDRITSPPHANYTYSILTGITTGIDMIMVPFNYTEFIDSLTSLVKHNFIPTSRIDDAVRRILRVKFMMGLFENPLADYSLVNQLGRQEHRDLAREAVRRSLVLLKNGQYAHKPLLPLPKKASKILVAGSHADNLGYQCGGWTIDWQGLSGNNLTTGTTILSAIKNTVDKDTMVVYKENPDLEYVKSNDFSYAIVVVGEHPYAETFGDSLNLTIPDPGPQTITNVCGGLKCVVVVISGRPVVIQPYLDTIEALVAAWLPGTEGQGVADVLFGDYGFTGKLPRTWFKTVDQLPMNVGDSHYDPLYPFGFGLTTKPNKVE 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g03543 628 FunFam Glycosyl hydrolase family protein 397 623 - -
Arst10g03543 628 SUPERFAMILY Beta-D-glucan exohydrolase, C-terminal domain 412 621 IPR036881 GO:0004553|GO:0005975
Arst10g03543 628 PANTHER PERIPLASMIC BETA-GLUCOSIDASE-RELATED 23 627 - -
Arst10g03543 628 PANTHER PERIPLASMIC BETA-GLUCOSIDASE-RELATED 23 627 - -
Arst10g03543 628 FunFam Beta-D-glucan exohydrolase isoenzyme ExoI 21 396 - -
Arst10g03543 628 Gene3D - 397 623 IPR036881 GO:0004553|GO:0005975
Arst10g03543 628 Pfam Glycosyl hydrolase family 3 C-terminal domain 412 621 IPR002772 GO:0004553|GO:0005975
Arst10g03543 628 Pfam Glycosyl hydrolase family 3 N terminal domain 47 375 IPR001764 GO:0004553|GO:0005975
Arst10g03543 628 Gene3D - 21 396 IPR036962 GO:0004553|GO:0005975
Arst10g03543 628 PRINTS Glycosyl hydrolase family 3 signature 294 312 IPR001764 GO:0004553|GO:0005975
Arst10g03543 628 PRINTS Glycosyl hydrolase family 3 signature 178 194 IPR001764 GO:0004553|GO:0005975
Arst10g03543 628 PRINTS Glycosyl hydrolase family 3 signature 108 124 IPR001764 GO:0004553|GO:0005975
Arst10g03543 628 PRINTS Glycosyl hydrolase family 3 signature 224 240 IPR001764 GO:0004553|GO:0005975
Arst10g03543 628 PRINTS Glycosyl hydrolase family 3 signature 132 151 IPR001764 GO:0004553|GO:0005975
Arst10g03543 628 SUPERFAMILY (Trans)glycosidases 26 411 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g03543 Arst-Chr10 103428106 103432953 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g03543 11 627 Glycoside Hydrolase AT5G20950 75.851 0.0 961
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g03543 K05349 - gmx:100819414 1088.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst10g03543 10 103428106 103432953 Arst10g03543 10 103428106 103432953 ECH