Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g03517 ATGAACGTCGATCGCGACCAATCTCACCTCACTACGAAGGTCCAGACCCTTCAAACCCTAACCGCTGGCCCTCTTTCCTCCTCGATCGCCAAGCTCTCCGCTTCCTCACGCTGCATTCCTTCCGACAAGGACTTTCACTTCTACCGCAACTTCGACGAATTCAAGGTCCCGATCGCCGATATCGCCAGGGAATCGCGGTCGATTCTTGAAGCCATCGGTGCCTCCGGGAGCACTTGGGGCAGGGAGGCGGCAACAGCGACGGCAGGGGCGTTCCCCGCCGACATGGACGACGCGTACGACTGGCTGGTGAGCGTTAACGACGACATTTTGGAACGGTTTGACGTGTTGGCGGACGAGTGCAGGAGGGTTCGTCAGCAGCAGGAGGAGGCTGGGCGTCCGGCGAGTTCTACAGCGGCGATGGAGGGTTCTGACGACGGCTTTCAGTTGGTTTGTGGGAAGAAAAAGAGAGGGGGAAGTCGTTTGGGGTCTCTGGGGAATGTGACCATGGATTCAGAGACGAGTTTGGCGGCGTCGGCCGTTAAGGTAGCAACGAAGGACAAGAAGACAGCGGGGCCGAAGCCAAAGGTTCCGTTTCACATACCAACAATTCGGAGGCCTCAGGAAGAGTTTAACATACTGGTTAACAATTCAAACATGCCTTTTGAGCATGTTTGGTTGGAGAGGAGTGATGATGGTCTGAAGTTTATTCATCCACTGGAAAAGCTCAATGTTTTGGACTTTGTTGACAAAGATCTTGGTAATCTTGTGCCAGTGAAACCTTCCTCCCTAGATAGCACCCCCTTCAATCTAGTGGATGACGTCAAAGGTTTGAAGGAGTTGGCTGCTAAGCTGCGTTCTGTTGATGAATTTGCGGTTGATTTGGAGCACAATCAATATCGATCATTCCAAGGGTTGACCTGTCTGATGCAAATCTCAACAAGATCTGAAGATTTTGTTATAGACACTTTGAAACTCCGTATTCATGTTGGACCCTATCTAAGGGAAATCTTCAAGGATCCTTCGAAGAGGAAGGTCATGCATGGTGCTGATCGAGATATTGTGTGGCTCCAACGAGATTTTGGCATTTACATTTGTAATTTATTTGACACTGGCCAGGCTTCAAAGGTGTTAAAATTGGAGAGAAATAGTTTGGAGTATCTTCTGCATCACTTCTGTGAGGTTACTGCAAACAAAGAATACCAGAATGCAGATTGGAGGTTACGCCCTCTTCCTAATGAGATGCAAAGATATGCAAGAGAAGATACACACTATCTGCTGTATATCTATGATTTGATGAGGATTAAGCTATTTTCGATGCCTAAGGAGTCTGAAAGTTCTGATACACCTCTGGTAGAGGTGTACAAGCGCAGTTATGATGTCTGCATGCAGCTATATGAGAAAGAACTTTTGACAGAGAACTCCTACCTCCACATATATGGGTTGCAAGGCGCTGATTTTAATGCTCAACAGCTTGCCATTGTTTCAGGCCTTTGTGAATGGCGGGACCTTGTTGCCCGGGCAGAGGATGAGAGTACTGGATATGTATTGCCAAATAAATCTCTTCTTGAAATTGCTAAACAGATGCCTCTCACTACAAGCAAGCTGCGGCGATTGGTAAAGTCAAAGCATCCATACATTGAACACAATCTTGATACTGTTGTTAGCATAATTAGGAATTCCCTTCAAAATGCTGCTGCCTTCGAAGAAGCTGCCCAACAATTGAAACAACTTGCTGCTTCTGCATCAGAAGTTGTAAATGTCAAAGGTGGAAGTGAAGATGCGCAGCAACACACACAAAACCCAAAGGAAACTATCCAGCAACAGGGTACAAACGTTCTTGTAAAAGTCAAGCCCGCAAGCCACCCTTCAGAGCCCTCAAGGGACAGTCTTACTATTGCAGAGCAGCATAAGGATGGAAATGGTAGCAGATTTGCAATCACAAAGGGAAATGGTGCCACTGTTCAAGTGCTAAAAAAGCCTACTGGCGCTTTTGGAGCACTGCTGGGAAATTTAGCTTCAAAGAGGAAGCTTGATCCTGATAAGGGCAAGGAAGATACCAAGCTGGAGCAGATTAAATCTTCAGTTAATCTTCCTTTCCATTCATTTTCGGGCAGAAATGAGAAGCCAAATCCTGTGGTAGAACCTCCTACTGTAGCATCTGAAACATCTGACTTACAGAAACCTATTTTAGAACCAGTTTCCACCTCCAGTCTAGAAGAGATCATAATGCTAGAGTCCGGTGCGGGTGAAGAAAATACAGAGCAGAATGACCAAGAAAATTCTAACGAACACAGGGAGAAAAACTCCAGCGCGTCCACTTCAGGAGAAGAGGACGACAACAACGAGCCATCTTCTTTGTCAGAATTGTCATCAAGCTTTCAAAAGTGCTTTCAGTCAAACAATAAACAGAGTAAAACCAAACAACCCAAGAAACTAGATCAACCCGGTGGCTTGTTGAAGCTGAAGCCGTTTGACTATGAAGAGGCTAGAAAACATATCAAGTTTGGGGAAAAGACAAATCATTCATCTCCGGAGAATGATGATAGCCATAGAGAGCAAGATGACTCAGGTAGCAAGAAGAAACGTTCAACGGGACAGGGACAGGGGCAAACAAGTGATTTGGCAAAACAATTGCTGCAAGGTAGAAGACGCCAGGCATTTCCAGCTTCTGGGAATCGTAGTGCAACTTTCCGCTATGATTCATGA 2706 0.4623 MNVDRDQSHLTTKVQTLQTLTAGPLSSSIAKLSASSRCIPSDKDFHFYRNFDEFKVPIADIARESRSILEAIGASGSTWGREAATATAGAFPADMDDAYDWLVSVNDDILERFDVLADECRRVRQQQEEAGRPASSTAAMEGSDDGFQLVCGKKKRGGSRLGSLGNVTMDSETSLAASAVKVATKDKKTAGPKPKVPFHIPTIRRPQEEFNILVNNSNMPFEHVWLERSDDGLKFIHPLEKLNVLDFVDKDLGNLVPVKPSSLDSTPFNLVDDVKGLKELAAKLRSVDEFAVDLEHNQYRSFQGLTCLMQISTRSEDFVIDTLKLRIHVGPYLREIFKDPSKRKVMHGADRDIVWLQRDFGIYICNLFDTGQASKVLKLERNSLEYLLHHFCEVTANKEYQNADWRLRPLPNEMQRYAREDTHYLLYIYDLMRIKLFSMPKESESSDTPLVEVYKRSYDVCMQLYEKELLTENSYLHIYGLQGADFNAQQLAIVSGLCEWRDLVARAEDESTGYVLPNKSLLEIAKQMPLTTSKLRRLVKSKHPYIEHNLDTVVSIIRNSLQNAAAFEEAAQQLKQLAASASEVVNVKGGSEDAQQHTQNPKETIQQQGTNVLVKVKPASHPSEPSRDSLTIAEQHKDGNGSRFAITKGNGATVQVLKKPTGAFGALLGNLASKRKLDPDKGKEDTKLEQIKSSVNLPFHSFSGRNEKPNPVVEPPTVASETSDLQKPILEPVSTSSLEEIIMLESGAGEENTEQNDQENSNEHREKNSSASTSGEEDDNNEPSSLSELSSSFQKCFQSNNKQSKTKQPKKLDQPGGLLKLKPFDYEEARKHIKFGEKTNHSSPENDDSHREQDDSGSKKKRSTGQGQGQTSDLAKQLLQGRRRQAFPASGNRSATFRYDS 901
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g03517 901 FunFam Protein RRP6-like 2 isoform A 202 472 - -
Arst10g03517 901 SUPERFAMILY HRDC-like 469 564 IPR010997 GO:0000166|GO:0044237
Arst10g03517 901 PANTHER POLYMYOSITIS/SCLERODERMA AUTOANTIGEN-RELATED 21 897 IPR045092 GO:0000175|GO:0000467
Arst10g03517 901 MobiDBLite consensus disorder prediction 757 773 - -
Arst10g03517 901 SUPERFAMILY Ribonuclease H-like 203 441 IPR012337 -
Arst10g03517 901 Gene3D HRDC domain 477 590 IPR044876 -
Arst10g03517 901 SMART 35exoneu6 268 437 IPR002562 GO:0003676|GO:0006139|GO:0008408
Arst10g03517 901 MobiDBLite consensus disorder prediction 862 878 - -
Arst10g03517 901 CDD Rrp6p_like_exo 264 456 - -
Arst10g03517 901 Gene3D - 197 476 IPR036397 GO:0003676
Arst10g03517 901 MobiDBLite consensus disorder prediction 774 805 - -
Arst10g03517 901 Coils Coil 557 577 - -
Arst10g03517 901 ProSiteProfiles HRDC domain profile. 487 567 IPR002121 GO:0003676
Arst10g03517 901 Pfam PMC2NT (NUC016) domain 34 120 IPR012588 GO:0000176|GO:0006396
Arst10g03517 901 SMART hrdc7 487 567 IPR002121 GO:0003676
Arst10g03517 901 MobiDBLite consensus disorder prediction 716 733 - -
Arst10g03517 901 MobiDBLite consensus disorder prediction 698 901 - -
Arst10g03517 901 Pfam HRDC domain 490 557 IPR002121 GO:0003676
Arst10g03517 901 MobiDBLite consensus disorder prediction 887 901 - -
Arst10g03517 901 FunFam Putative exosome component 10 474 569 - -
Arst10g03517 901 MobiDBLite consensus disorder prediction 823 861 - -
Arst10g03517 901 Pfam 3'-5' exonuclease 271 433 IPR002562 GO:0003676|GO:0006139|GO:0008408
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g03517 Arst-Chr10 103320785 103329055 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g03517 K12591 - gmx:100815329 1255.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst10g03517 10 103320785 103329055 Arst10g03517 10 103320785 103329055 ECH