Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g03442 ATGGACAATTCCTCGCAGAACAACAAGGAGCAAGTAATCGAAGATCCAGAGAAGAAGAAGAAGAAGGAGGAGAAGGCAAGAGAAAAGCAATTGAAGAAAGAGAAATTCCTCCAAAAGCAAGCTCAGCAGCAACAAGCTCAGCAATCCAATGCCCCAAAAAAGAGTGAAAAGAAAGCTGCCAGACGTGGCGCGGAGGATGAGAATCCTGAAGACTTCATTGATCCTGAGACCACTTCTGGTGACAAGAAACGTATGTCTCGTCAAATGGCAAAGCAGTACAGTCCAACTGCCGTCGAGAAATCGTGGTATGAGTGGTGGGAGAAATCAAAGTATTTTGTGGCAGACTCAAGCAGCTCCAAACCACCTTTTGTTATTGTTTTACCCCCACCAAATGTGACTGGAGCTCTTCACATTGGTCATGCTCTAACAGCTGCAATTGAGGACACCATGATTCGTTGGCGAAGGATGTCTGGATACAATGCTTTGTGGGTGCCTGGGATGGACCATGCTGGGATTGCCACACAGGTGGTTGTGGAGAAAAAGATAATGCGTGAACGAAAACTAACTAGGCATGATCTGGGCCGTGAGAAATTCGTTTCTGAGGTGTGGGAGTGGAAAGACAAGTATGGAGGCACAATATTACAACAGTTACGTCGATTAGGAGCCTCTCTAGATTGGACACGTGAGTGCTTCACAATGGATGATCAAAGATCTAAAGCTGTGACAGAGGCATTTGTGATGCTTTACAAGCAAGGCCTTATTTATAGGGACCTTCGTTTGGTGAACTGGGATTGTGTATTACGAACTGCTATATCTGATATTGAGGTGGATTATATTGATGTAAAAGAAAGGACCCTGCTAAAGGTCCCCGGGTATGACAAACCAGTAGAGTTTGGAGTTCTAACCAAATTTGCATACCCCTTGGAAGGGAACCTAGGTGAAATTATTGTTGCCACAACTAGGATTGAAACCATGCTTGGTGACACTGCTATTGCCGTACATCCTGATGATCAAAGATACAGCCAATTTCATGGAAAATGTGTTATTCATCCATTCAGTGGAAGAAAACTTCCTATAGTTTGTGATGCTATTCTTGTTGATCCAGCATTTGGTACAGGTGCCGTCAAGATCACACCTGCCCATGATCCAAATGATTTTGAGGTGGGAAAACGTCACAACCTTGAATTCATTAATGTTTTCACTGATGATGGAAAAATAAATTCCAATGGTGGCTCTGAATTTTTGGGCATGCCACGATTTAAAGCTCGAGAAGCAATAGCAGAAGCATTACAAAAGAAGGGACTTTATAGGGGTTCTGAAAACAATGAAATGCGCCTTGGTGTATGTTCAAGAAGCAATGATGTTATCGAGCCTATGATAAAGCCCCAGTGGTATGTTAGTTGTGGAGATATGGCAAAGGAAGGTCTTAATGCTGCTGTGGATGAGGAAAACATAAAGCTAGAAATTGTTCCAAAACAATATTTGGCTGATTGGAAGAGATGGCTAGAAAACATACGCGATTGGTGCATTTCACGGCAGTTGTGGTGGGGTCACCAAATACCTGCATGGTATGTCACTTTGGAAGATGACCAACTGAAGGAGTTTGGTGTTTACAATGATCATTGGGTAGTGGCAAGAAATGAGGAGGAGGCCCAAGCTGAGGCTAGCCAAAGGTATAGTGGAAAGAAGTTCCATTTGATCCGCGACCCCGACGTTCTTGATACATGGTTTTCTTCTGGTCTGTTCCCATTATCTGTGTTGGGCTGGCCTGATGACACAAAAGACCTAAAGACATTCTATCCAACTTCTGTTTTGGAAACCGGTCATGATATCTTATTCTTCTGGGTTGCACGTATGGTGATGTTAGGAATGAAGTTGGGCGGTGATGTGCCTTTTAGACAGATTTATTTACATCCCATGATTCGTGATGCACATGGGCGCAAAATGTCCAAGTCATTAGGAAATGTTATTGATCCAATCGAAGTGATAAATGGGATATCGCTGGAAGGTCTACATAAGAGGTTAGAGGGTGGTAACCTAGACCCTAAAGAACTAGCTGTTGCGATAGAGGGTCAGAAGAAGGACTTTCCAAATGGCATTGAGGAATGTGGTGCAGATGCTCTCCGTTTTGCACTGGTTTCATACACAGCTCAGTCTGATAAAATCAACCTTGATATTCAAAGGGTGGTTGGGTATCGTCAATGGTGTAATAAATTGTGGAATGCTATACGATTTGCCATGAGCAAGCTTGGAGATGATTATATTCCTCCTGCAAATTTGGGTCCAGATGTTCTTCCATTTAGCTGCCAGTGGATTCTCTCGGTGTTAAACAAAATCATAACTAAAACAATAAAGTCTCTAGAATCATTTGAGTTCTCACATGCTACCACTGCTGTGTATTCTTGGTGGCAGTATCAATTGTGTGATGTCTTTATTGAAGTGATTAAACCTTACTTTGCTGGTAATGATCCCAAGTTTGCTTCTGAAAGACGCCATGCACAGGATACCTTGTGGTTCTGTCTTGATAATGGCCTTCGATTGCTTCATCCATTTATGCCGTTTGTTACGGAAGAATTGTGGCAGCGGCTTCCTTCACCCAAGGAATGTAAAAGAGCAGATTCTATCATGATATGTCCTTATCCATCACCTACAGAGGGCTGGAATAATGAAACAGTGGAGAATGATATGGATCTTGTCGAGTCGACTGTTAAATCTCTCAGGTCACTTGCAAAAGAGAGTCGCGATAGGCGACCGGCTTTTGTTCTTTGCTTAACACGGGCGGTTGAGGAGATTATATCAAGCCGTCAACTGGAGATTGTAACGCTAGCAAATCTGTCCTCTTTAACCGTGATCAATGAAAACGATGCTGTTCCTTCTGGGTACGCGAATACAGTTGTAAACGAAACCCTTTCTGTTTACTTAGAGCTTCAAGGGACAAGTTCTGCAGAAGCAGAGCAAGGAAAGATGAAGAAGATAGAGGAGCTTAAGAAGCAAATAGAAAAACTAGAGAAGATTATGAGTGCTCCAGGTTATGAAGAGAAGGTTTTGCCTCAAGTCAGAGCTAAGAACCAGGAGAAGCTCGACTCGCTAAAGGAGCGGCTGCTGCTCGAGGAAACGGCTGGACTTACTATAGCTTCAAAATAG 3144 0.4307 MDNSSQNNKEQVIEDPEKKKKKEEKAREKQLKKEKFLQKQAQQQQAQQSNAPKKSEKKAARRGAEDENPEDFIDPETTSGDKKRMSRQMAKQYSPTAVEKSWYEWWEKSKYFVADSSSSKPPFVIVLPPPNVTGALHIGHALTAAIEDTMIRWRRMSGYNALWVPGMDHAGIATQVVVEKKIMRERKLTRHDLGREKFVSEVWEWKDKYGGTILQQLRRLGASLDWTRECFTMDDQRSKAVTEAFVMLYKQGLIYRDLRLVNWDCVLRTAISDIEVDYIDVKERTLLKVPGYDKPVEFGVLTKFAYPLEGNLGEIIVATTRIETMLGDTAIAVHPDDQRYSQFHGKCVIHPFSGRKLPIVCDAILVDPAFGTGAVKITPAHDPNDFEVGKRHNLEFINVFTDDGKINSNGGSEFLGMPRFKAREAIAEALQKKGLYRGSENNEMRLGVCSRSNDVIEPMIKPQWYVSCGDMAKEGLNAAVDEENIKLEIVPKQYLADWKRWLENIRDWCISRQLWWGHQIPAWYVTLEDDQLKEFGVYNDHWVVARNEEEAQAEASQRYSGKKFHLIRDPDVLDTWFSSGLFPLSVLGWPDDTKDLKTFYPTSVLETGHDILFFWVARMVMLGMKLGGDVPFRQIYLHPMIRDAHGRKMSKSLGNVIDPIEVINGISLEGLHKRLEGGNLDPKELAVAIEGQKKDFPNGIEECGADALRFALVSYTAQSDKINLDIQRVVGYRQWCNKLWNAIRFAMSKLGDDYIPPANLGPDVLPFSCQWILSVLNKIITKTIKSLESFEFSHATTAVYSWWQYQLCDVFIEVIKPYFAGNDPKFASERRHAQDTLWFCLDNGLRLLHPFMPFVTEELWQRLPSPKECKRADSIMICPYPSPTEGWNNETVENDMDLVESTVKSLRSLAKESRDRRPAFVLCLTRAVEEIISSRQLEIVTLANLSSLTVINENDAVPSGYANTVVNETLSVYLELQGTSSAEAEQGKMKKIEELKKQIEKLEKIMSAPGYEEKVLPQVRAKNQEKLDSLKERLLLEETAGLTIASK 1047
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g03442 1047 Gene3D HUPs 90 288 IPR014729 -
Arst10g03442 1047 MobiDBLite consensus disorder prediction 11 36 - -
Arst10g03442 1047 CDD ValRS_core 121 724 - -
Arst10g03442 1047 MobiDBLite consensus disorder prediction 37 53 - -
Arst10g03442 1047 SUPERFAMILY Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 736 991 IPR009080 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Arst10g03442 1047 MobiDBLite consensus disorder prediction 1 93 - -
Arst10g03442 1047 Gene3D - 730 913 - -
Arst10g03442 1047 Gene3D - 297 442 IPR009008 GO:0002161|GO:0006418
Arst10g03442 1047 MobiDBLite consensus disorder prediction 54 68 - -
Arst10g03442 1047 FunFam Valine--tRNA ligase, mitochondrial 416 649 - -
Arst10g03442 1047 FunFam Valine--tRNA ligase, mitochondrial 679 914 - -
Arst10g03442 1047 PRINTS Valyl-tRNA synthetase signature 451 464 IPR002303 GO:0000166|GO:0004832|GO:0005524|GO:0006438
Arst10g03442 1047 PRINTS Valyl-tRNA synthetase signature 569 590 IPR002303 GO:0000166|GO:0004832|GO:0005524|GO:0006438
Arst10g03442 1047 PRINTS Valyl-tRNA synthetase signature 334 351 IPR002303 GO:0000166|GO:0004832|GO:0005524|GO:0006438
Arst10g03442 1047 PRINTS Valyl-tRNA synthetase signature 600 618 IPR002303 GO:0000166|GO:0004832|GO:0005524|GO:0006438
Arst10g03442 1047 PRINTS Valyl-tRNA synthetase signature 123 134 IPR002303 GO:0000166|GO:0004832|GO:0005524|GO:0006438
Arst10g03442 1047 Hamap Valine--tRNA ligase [valS]. 89 1045 IPR002303 GO:0000166|GO:0004832|GO:0005524|GO:0006438
Arst10g03442 1047 Pfam Anticodon-binding domain of tRNA ligase 770 912 IPR013155 GO:0004812|GO:0006418
Arst10g03442 1047 Coils Coil 19 47 - -
Arst10g03442 1047 SUPERFAMILY ValRS/IleRS/LeuRS editing domain 296 446 IPR009008 GO:0002161|GO:0006418
Arst10g03442 1047 PANTHER VALYL-TRNA SYNTHETASES 66 1038 IPR002303 GO:0000166|GO:0004832|GO:0005524|GO:0006438
Arst10g03442 1047 PANTHER VALYL-TRNA SYNTHETASES 66 1038 IPR002303 GO:0000166|GO:0004832|GO:0005524|GO:0006438
Arst10g03442 1047 Pfam tRNA synthetases class I (I, L, M and V) 102 725 IPR002300 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Arst10g03442 1047 FunFam Valine--tRNA ligase, mitochondrial 297 438 - -
Arst10g03442 1047 CDD Anticodon_Ia_Val 724 863 IPR033705 -
Arst10g03442 1047 SUPERFAMILY Nucleotidylyl transferase 88 734 - -
Arst10g03442 1047 Gene3D HUPs 474 723 IPR014729 -
Arst10g03442 1047 FunFam Valine--tRNA ligase, mitochondrial 91 289 - -
Arst10g03442 1047 ProSitePatterns Aminoacyl-transfer RNA synthetases class-I signature. 130 141 IPR001412 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Arst10g03442 1047 NCBIfam valine--tRNA ligase 89 1027 IPR002303 GO:0000166|GO:0004832|GO:0005524|GO:0006438
Arst10g03442 1047 Coils Coil 982 1005 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g03442 Arst-Chr10 102822746 102832724 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g03442 K01873 - gmx:100798111 1814.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst10g03442 10 102822746 102832724 Arst10g03442 10 102822746 102832724 ECH