Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g03310 ATGGCTTCTTTTTCCTTTTCTTCTTTCAATACTGGATCATTTGTTGATATAGCTCAAAGAAGATATTTTGGGGTTTGTGGAGGTTTGTGCACTAGTTCATTTGTTTTTCCTTCTCCGGGGTTTAGATTTAATCAGTCATACAAATTTCAACATAATTTGGTTTGGCACCCGAAATTGAAGTATTATTATGATGATAGAAGATGTCGAAATGCCTCACTGAAGTTTCCTTATTGTTGCAATTCTCAACATGGTTTTTCCGGTAACAATAAAATTGAGCCACTTGTGAGTAGTAGAAGCAGGGTTGAGAGAAAGTCACACTATGGTAAAGGAGATAGTAATAGGTTGAAGAAGAGATTTTCGTTGAGGTTGCGGCCGAGGTTAAGGTTATTGGCTATGAGAATGAGGAGGGCATCCATTAAGTCCTTTTTGAATGAGGTGGGAATCTTTGTCCGTAAGAATATTAGAACCGTGGCATTTTCTGCCTCGGTTTCTATTGTTTTCAGCCTTTGTTTCCTGTTTTTGAAGTTGACTGCGCTTCCTCCGGTGAAAACCGTACCGTATTCTGACTTGATTACAAGCCTTCAGAGTGGGTATGTTGCGAAAGTGTTGCTGGAAGAGGGGTCCCGGCGCATATATTACAACATGAACAATCCAGTTGTTGAAAATGATCAGGTTTCTGGAAATGAATTGCAAGTTGCTGATGTTTCAGTTGACAGGGATGTAGATAAGCCTCCAAGTGAGGGAGCTTCAAGCGCTGGCAAAACCCCAGCATTGAATATATTAGGGAAATTTTCGAAGGCTCGGGCTTCAGTTCCTGAGTGGCAGTATTCCACAAGAAAAATTGACCGTGATGAAAAATTCCTTCTTAGTTTAATGAGAGAAAAAGGAGTTTCATATAGTTCTGCCCCTCAATCTGTGTTAATGTCAATGAGGAATACTTTGATAACCGTGATTACACTGTGGATACCGTTGATTCCAATGATGTGGCTTCTATACCGTCAGCTTTCTGCTGCTAATAGTCCAGCTAGGAAGCAGAAACCTAACGGCCAGACAGTTGGATTTGATGATGTTGAAGGAGTTGATTCTGCAAAAGTAGAGCTCATGGAGATAGTTTCATGTTTGCAAGGGGATATAAACTACCAAAAGGTAGGGGCAAAATTACCTCGAGGTGTGTTGCTGGTAGGCCCCCCTGGAACAGGGAAAACATTACTTGCACGTGCTGTGGCGGGGGAAGCAGGTGTACCCTTTTTCACCGTATCTGCCAGTGAGTTTGTGGAATTGTTTGTTGGGAGAGGAGCAGCTAGAATCAGAGACCTTTTTAATGCAGCAAGGAAATTTGCACCATCAATCATATTCATAGATGAGCTTGATGCCGTTGGAGGCAGGCGCGGAAGAAGTTTCAACGATGAACGTGACCAAACACTAAACCAATTGCTCACAGAAATGGATGGATTTGAATCTGAGATGAGAGTGGTTGTCATTGCAGCAACTAATCGCCCGGAAGCTTTGGATCCAGCCCTATGTCGCCCTGGTCGTTTCTCGCGAAAAGTATATGTCGGGGAGCCTGATGAGGAAGGAAGGAGAAAGATATTGGCTGTACATCTAAGAGGTGTTCCCTTAGAGGAGGACACAAACATCATTTGTCATTTAATCGCTTCTCTTACTGCTGGCTTTGTAGGTGCTGACCTGGCAAACATCGTCAATGAAGCTGCTTTGCTTGCTGCCCGTAGAGGTAGTGAAGGTGTGGCAAGGGAGGATATAATGGAAGCAATTGAAAGAGCAAAGTTTGGAATCAATGATAAGCAACTTAGGTCAAATAAACTAAGCAAGGAGTTGGTTAAGCTCTTCCCTTGGATGCCATCATTGATGGGAAGAAGTGATAAGAGACAGGATGACCTACAAGGACCACTAGGTTATCAATCATTGAGCTCATGA 1935 0.4269 MASFSFSSFNTGSFVDIAQRRYFGVCGGLCTSSFVFPSPGFRFNQSYKFQHNLVWHPKLKYYYDDRRCRNASLKFPYCCNSQHGFSGNNKIEPLVSSRSRVERKSHYGKGDSNRLKKRFSLRLRPRLRLLAMRMRRASIKSFLNEVGIFVRKNIRTVAFSASVSIVFSLCFLFLKLTALPPVKTVPYSDLITSLQSGYVAKVLLEEGSRRIYYNMNNPVVENDQVSGNELQVADVSVDRDVDKPPSEGASSAGKTPALNILGKFSKARASVPEWQYSTRKIDRDEKFLLSLMREKGVSYSSAPQSVLMSMRNTLITVITLWIPLIPMMWLLYRQLSAANSPARKQKPNGQTVGFDDVEGVDSAKVELMEIVSCLQGDINYQKVGAKLPRGVLLVGPPGTGKTLLARAVAGEAGVPFFTVSASEFVELFVGRGAARIRDLFNAARKFAPSIIFIDELDAVGGRRGRSFNDERDQTLNQLLTEMDGFESEMRVVVIAATNRPEALDPALCRPGRFSRKVYVGEPDEEGRRKILAVHLRGVPLEEDTNIICHLIASLTAGFVGADLANIVNEAALLAARRGSEGVAREDIMEAIERAKFGINDKQLRSNKLSKELVKLFPWMPSLMGRSDKRQDDLQGPLGYQSLSS 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g03310 644 Gene3D - 335 520 IPR027417 -
Arst10g03310 644 SMART AAA_5 387 523 IPR003593 GO:0016887
Arst10g03310 644 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 352 593 IPR027417 -
Arst10g03310 644 FunFam Probable inactive ATP-dependent zinc metalloprotease FTSHI 4, chloroplastic 522 603 - -
Arst10g03310 644 Pfam ATPase family associated with various cellular activities (AAA) 391 520 IPR003959 GO:0005524|GO:0016887
Arst10g03310 644 FunFam ATP-dependent zinc metalloprotease FtsH 335 520 - -
Arst10g03310 644 ProSitePatterns AAA-protein family signature. 491 509 IPR003960 GO:0005524|GO:0016887
Arst10g03310 644 PANTHER METALLOPROTEASE M41 FTSH 145 611 - -
Arst10g03310 644 Pfam AAA+ lid domain 551 589 IPR041569 -
Arst10g03310 644 Gene3D - 522 607 - -
Arst10g03310 644 Pfam FtsH Extracellular 165 304 IPR011546 GO:0004176|GO:0004222|GO:0005524|GO:0008270|GO:0016020
Arst10g03310 644 CDD RecA-like_FtsH 352 519 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g03310 Arst-Chr10 101717931 101722295 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g03310 136 643 Miscellaneous Gene Families AT3G02450 71.063 0.0 716
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g03310 - - aprc:113867103 1003.43