Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g03257 ATGAACGGAGGCCCCTCTGGTTTTACAAATGCTCCGGTCACAAGGGCTTTCATCATCGCCTCAGCGCTTTTCACAATCTTCTTTGGGATCCAGGGTCGTTTCAACTCTCTGGGGTTGTCTTATCAGGATATTTTTGGAAAGCTTCGTCTCTGGAAATTGATTATGTCTGTATTTGCATTCTCATCGACACCAGAGATGATGTTTGGACTTTACCTGCTATACTACTTCAGGGTTTTTGAGAGACAGATAGGTTCCAACAAATATTCGGTATTTATCGTGTTCTCTGTATTAACTTCTCTACTGTTTGAGGTGATTTCTTTAGCACTCCTTAGAGATCCTGCAGCGAAGCTAGTCACTCCTGGACCTTATGGTCTCATATTTGCTTCATATGTACCTTTTTTCTTAGACATTCCAGTTTCAACACGGATTCGTGTATTTGGTATCCCCTTCTCTGATAAGTCATTCATATATCTAGCTGGTTTGCAGCTTGTGTTATCATCATGGAGAAGGTCCCTCTTACCAGGAATGTGTGGCATCCTTGCGGGATCCTTGTACCGTTTGAATGTCTTTTATATCCGAAAAGCAAAGTTCCCAGATTTCATCTCATCATTCTTCTCACGATTTTCATTGCCATCCATGGGGAGTCCACGCGGCCCATCAACAAGGAATGTTGCGGGAAACGTACCATCCTATCCAACTCACCAAATGGAGAGAAACTACCCTGCTCCAGTACAATATGCAGTAGAACCATCAGAGGACTCAATCACTACACTTGTTTCGATGGGTTTCGACAGGAACTCTGCACGACAAGCACTGGTGCAGGCCAGAAATGATGTCAATGTGGCCACAAACATCCTTCTAGAGGCGCAGTCCCATTAA 879 0.4391 MNGGPSGFTNAPVTRAFIIASALFTIFFGIQGRFNSLGLSYQDIFGKLRLWKLIMSVFAFSSTPEMMFGLYLLYYFRVFERQIGSNKYSVFIVFSVLTSLLFEVISLALLRDPAAKLVTPGPYGLIFASYVPFFLDIPVSTRIRVFGIPFSDKSFIYLAGLQLVLSSWRRSLLPGMCGILAGSLYRLNVFYIRKAKFPDFISSFFSRFSLPSMGSPRGPSTRNVAGNVPSYPTHQMERNYPAPVQYAVEPSEDSITTLVSMGFDRNSARQALVQARNDVNVATNILLEAQSH 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g03257 292 Pfam Rhomboid family 49 189 IPR022764 GO:0004252|GO:0016020
Arst10g03257 292 SMART uba_6 251 288 IPR015940 -
Arst10g03257 292 SUPERFAMILY UBA-like 245 289 IPR009060 GO:0005515
Arst10g03257 292 Pfam UBA/TS-N domain 251 286 IPR015940 -
Arst10g03257 292 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 249 289 IPR015940 -
Arst10g03257 292 Gene3D - 9 188 IPR035952 -
Arst10g03257 292 Gene3D - 222 291 - -
Arst10g03257 292 SUPERFAMILY Rhomboid-like 11 187 IPR035952 -
Arst10g03257 292 PANTHER RHOMBOID-RELATED PROTEIN 3 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g03257 Arst-Chr10 101147567 101151517 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g03257 K25216 - gmx:100777938 516.924
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst10g03257 10 101147567 101151517 Arst10g03257 10 101147567 101151517 ECH