Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g03202 ATGACCCGTTTCTCCGAGAAGCTCCGTTTGAGTTGGCTGCTCCAGAAACCGACCCGCTTTCTCGCTCTACTTTCTCTCTCCACCTTCAGACTCTGCAAGTCCATCGCACGCTATCTCCTCTCCCAAACCCTACCCCATCTCTCCATGGACAACCTCTTCGCCGACCACTCCGACTACTTCTCCGATGACTTCGATTCCAACTCCTACCGCTCCCGCCCCAACCGCCGCTACCTCCACCCTCACGACACCCGCGATTTCCCCGACGAGAGGGTTTACTTGCTCCCCTACAGGTGGTGGATTGAGGCGGAAGGTGACGGAGATCATGTGGAGGGTGTTCTGTACACAGTGACGTCGAATTCTGACTCCGACTCTGAGATTTTGCTCCATTTGAGGAAGGAAGAGGACCCTGAGAAGATTAGCAGTTTGGACGTAGGGTTTTCAGGTCGTCAGTATGCGTTGGTTCCTGAAGGAATTTGGTTGCGTGCTCTCAAACGGTATAATGATTTTAATAACGCTATGAAAGATTTTGGGAGCCTCTTCTTTGCGGAGGACTGTTTGCATGACTTATTCCCCTTGCAAATTAGAATATATGTTTCATGGGAAACAAATTCACTGGTAGCAAAGATATGCCAAAAGGAAAATGTGGCCAAATTCTACAAGAAAGCCTGTGACATATTCGACTCTGAGCATAGTCCAATGCATATTTGGGACTTTTCAGGGCAAACAACCCAGTTATTCATCAATGACAAAGTGACAAATGATTCTCTTTCTCAACTTGGAAAGGAGGTTCTATTGGAGTTGCACGTTCACGGGCTTCCAGAGTTAATGCATGGTAATGGAAGTAATGATATGATTGTGGATAGGTCTGATATGGAATGTTCTTCCCACAGTGGCTGTGTTATTATGAATGGAAGCACTGATTGTGTGATCCCCAATGTAATATCAATGAACTCTATACAAAGCAGTAGCTATCAAGCAGTTCAAACTTTGGGTTTGACAGGATTGCAGAATCTTGGGAATACTTGTTTTATGAATAGTGCTATTCAGTGCTTGGCTCATACGCCAAAGCTTGTTGATTTTTTTCTTGGAGATTATCGTAAAGAGATCAATTATGAAAATCCCCTGGGAATGAATGGAGAACTTGCTTTAGCTTTTGGAGATTTACTTAGAATGCTATGGGTTCCCGGAGCAAGGCCTGTGGTACCAGAAATGTTCAAGACAAAACTGGCTAATTTTGCCCCTCAGTTTAGTGGTTATAGCCAGCACGATTCTCAAGAACTTCTTGCTTTTTTGTTGGATGGACTACATGAAGACCTTAATCGTGTAAAACGCAAGCCATATCATGAAGTCAAGGATGCAGATGGCCGTCCAGATGAAGAAGTGGCTGAAGAGTACTGGCGAAATCACCTTGCTCGCAACGATTCCATTGTTGTTGATTTATGCCAAGGTCAGTTTCGATCGACATTGGTATGCCCTGTTTGCAAGAAGGTCTCTATCACATTTGACCCATTTATGTATTTATCTCTTCCATTACCTTCTACAACAACACGGACTATGACTCTGACTGTGATAAGCACTGATGGGATAACACTGCCTTCTACATTAACAGTAACACTGCCAGAAAGTGGAACAATCAAGAATCTTATTGGAGCTTTGAGTGCTTCTTGTTCTCTAAGAGATGATGAAACCCTCTTAGTGGCTGAGATCTACAAGAATCGAATTTTTCGTTTATTTGAGGATCTGTCTGATTCGTTATCTGAAATTAGAGATCAAGACAAACTTGTGGCTTATCGATTACAAAAATATGAAGAAGATGCTCCCTTGGTTGTTTTCTCACATGAGCGTTTGCTGGAAAATTCTGGGAAGGACACGTTTGAAAATCAGCTGTTTGGTATTCCACTTGTTACAAGGTTGTCCAGTATTTCTTGTGGAAATGATGTTCGTAGGGAGTTTCTGAAGTTAATCAATCCTTTTCTTAAGTTCTCTGAAGATGGATTAGATGAGTTTGATACTGCTGAAGATGTCAATAAAAAACTTGGTGAAGATGATGAATTGGGCGACACTACTAGCTCCCCAGCAATAGGAAGTGATGCAGACTCCACCAGTGGAGCAGAGGGCAACACCCAGTTGTGGGATGACTTTGAATTCTGCTTACCTGGTGGCCTAGGAGTAGAGAATTTAAGGACAAAATTGAACGAACCATTACCAATTACAACGTTATCCATGAAGCTGCAGGTGGTTGTTTTATGGTCAGATAGGATGCTTAAAAATTATGTTCCCTACATGAGCCAAACATTGCCTGAGGTTTTCAAGCCCCAGTTGTTCACCAAGAGAACACAAGAATCGATTTCTATATACAAGTGCCTTGAAGCATTTTTGAAAGAGGAACCTTTAGGACCAGAGGACATGTGGTACTGCCCCACCTGCAAAAAGCCTCAACAAGCAAGTAAAAAACTAGATCTTTGGAGATTGCCTGAAATCCTCGTTATTCATTTGAAGAGGTTCTCATACAGCAGATACTCCAAGAACAAGCTGGAAACATTTGTGGACTTTCCAATTAATGATCTGGATGTCTCAACATATGTTGCCCACCGAAATAGTCAGGCTTCGAACCACTATATGTTGTATGCAATTAGTTGTCACTATGGAGGATTAGGAGGAGGTCACTATACAGCATTTGTCCGTTATAGCCATGATAAATGGTACGAGTTTGATGATAGCAGGGTTGCCCCTGCCAGTGAAGACATGATAAAGACTTCTGCTGCTTATCTGCTTTTCTACAGAAAAATTTAG 2793 0.4271 MTRFSEKLRLSWLLQKPTRFLALLSLSTFRLCKSIARYLLSQTLPHLSMDNLFADHSDYFSDDFDSNSYRSRPNRRYLHPHDTRDFPDERVYLLPYRWWIEAEGDGDHVEGVLYTVTSNSDSDSEILLHLRKEEDPEKISSLDVGFSGRQYALVPEGIWLRALKRYNDFNNAMKDFGSLFFAEDCLHDLFPLQIRIYVSWETNSLVAKICQKENVAKFYKKACDIFDSEHSPMHIWDFSGQTTQLFINDKVTNDSLSQLGKEVLLELHVHGLPELMHGNGSNDMIVDRSDMECSSHSGCVIMNGSTDCVIPNVISMNSIQSSSYQAVQTLGLTGLQNLGNTCFMNSAIQCLAHTPKLVDFFLGDYRKEINYENPLGMNGELALAFGDLLRMLWVPGARPVVPEMFKTKLANFAPQFSGYSQHDSQELLAFLLDGLHEDLNRVKRKPYHEVKDADGRPDEEVAEEYWRNHLARNDSIVVDLCQGQFRSTLVCPVCKKVSITFDPFMYLSLPLPSTTTRTMTLTVISTDGITLPSTLTVTLPESGTIKNLIGALSASCSLRDDETLLVAEIYKNRIFRLFEDLSDSLSEIRDQDKLVAYRLQKYEEDAPLVVFSHERLLENSGKDTFENQLFGIPLVTRLSSISCGNDVRREFLKLINPFLKFSEDGLDEFDTAEDVNKKLGEDDELGDTTSSPAIGSDADSTSGAEGNTQLWDDFEFCLPGGLGVENLRTKLNEPLPITTLSMKLQVVVLWSDRMLKNYVPYMSQTLPEVFKPQLFTKRTQESISIYKCLEAFLKEEPLGPEDMWYCPTCKKPQQASKKLDLWRLPEILVIHLKRFSYSRYSKNKLETFVDFPINDLDVSTYVAHRNSQASNHYMLYAISCHYGGLGGGHYTAFVRYSHDKWYEFDDSRVAPASEDMIKTSAAYLLFYRKI 930
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g03202 930 ProSitePatterns Ubiquitin specific protease (USP) domain signature 2. 873 890 IPR018200 GO:0004843|GO:0006511
Arst10g03202 930 MobiDBLite consensus disorder prediction 678 705 - -
Arst10g03202 930 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 281 929 - -
Arst10g03202 930 MobiDBLite consensus disorder prediction 689 705 - -
Arst10g03202 930 Gene3D Cysteine proteinases 576 930 - -
Arst10g03202 930 CDD Peptidase_C19R 758 928 - -
Arst10g03202 930 Pfam Ubiquitin carboxyl-terminal hydrolase 333 927 IPR001394 GO:0004843|GO:0016579
Arst10g03202 930 ProSitePatterns Ubiquitin specific protease (USP) domain signature 1. 334 349 IPR018200 GO:0004843|GO:0006511
Arst10g03202 930 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 333 930 IPR028889 -
Arst10g03202 930 SUPERFAMILY Cysteine proteinases 331 929 IPR038765 -
Arst10g03202 930 Gene3D Cysteine proteinases 316 541 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g03202 Arst-Chr10 100435850 100441991 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g03202 784 930 Miscellaneous Gene Families AT4G31670 33.333 6.62e-17 83.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g03202 - K21343 gmx:100791802 1342.79