Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g03193 ATGGATACCTCCGTCTATGGTGTCTGCAACCACAAGAACTTCTCCTTCTTCCTCATTCTCGTATTCCTCGTCCCATTCCTTCTCCATTCCGCATCGTCTTCAACCTCTCCTCAGATCAACTCAAATTCCATCCTCGTCGCGCTCTTGGATTCTCACTACACCGAACTCGCCGAGCTAGTAGAGAAGGCACTCCTCCTTCAGAAGCTTGAAGAAGCTGTCGGCAACCACAACATCACAATCTTCGCACCACGCAACCATGCTCTCGAGCGAGACCTCGACCCTGAGTTCAAGCGCTTCCTTCTCGAACCTCGAAACCTCAACTCACTCCAGACCCTCCTCATGTCCCACATTCTCCCCACTCGCAGCAACGGAGATGGGGCGGTTGGTGTCTGAGGGTTACGTCCTAACGGTTCTGGCGCCGAACGACGAGGCCATGGCGAAGCTTACGACGGATCAATTGAGCGAACCGGGGGCGCCGGAGCAGATCATATACTATCACATCATACCGGAGTACCAGACGGAGGAGAGTATGTACAATGCCGTTAGAAGGTTCGGGAAGATTCGTTACGATACGTTGCGGTTGCCGCATAAGGTTGCGGCTCAGGAAGCTGATGGCTCTGTAAAATTCGGAAATGGCGATGGCTCTGCGTATTTGTTTGATCCTGATATCTATACGGACGGAAGGATCTCCGTCCAGGGGATCGACGGCGTTCTTTTCCCGCGGGAGGAGGAGGAGGAAGACAATAAGGCGGCGGCTCGCCGTAGAACAACCCCGCTTGTTAAAGTTGCTGCCAAGCCTAGGAGAGGGAAATTGATGCAAGTCGCTTGTGGCATGCTTGGAGCTTTTGGCTCAGTCTGCTAA 862 0.5336 MDTSVYGVCNHKNFSFFLILVFLVPFLLHSASSSTSPQINSNSILVALLDSHYTELAELVEKALLLQKLEEAVGNHNITIFAPRNHALERDLDPEFKRFLLEPRNLNSLQTLLMSHILPTRIPSAAWPPAATSVVRHTTLSSDYHLHLTTNSSGHKTVDSAAVLRPDDVVRPDGVIHGIERLLVPRSVQEDFNRRRSLRSIAAVLPEGAPEVDPRTHRLKKPAPVPAGAPPVLPIYDAMAPGPSLAPAPAPGPGGPRHHFNGERQVKDFIQTLLHYGGYNEMADILVNLTSLATEMGRLVSEGYVLTVLAPNDEAMAKLTTDQLSEPGAPEQIIYYHIIPEYQTEESMYNAVRRFGKIRYDTLRLPHKVAAQEADGSVKFGNGDGSAYLFDPDIYTDGRISVQGIDGVLFPREEEEEDNKAAARRRTTPLVKVAAKPRRGKLMQVACGMLGAFGSVC 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g03193 457 Gene3D FAS1 domain 260 412 IPR036378 -
Arst10g03193 457 ProSiteProfiles FAS1/BIgH3 domain profile. 40 183 IPR000782 -
Arst10g03193 457 Gene3D FAS1 domain 44 186 IPR036378 -
Arst10g03193 457 SMART fasc_3 79 186 IPR000782 -
Arst10g03193 457 SMART fasc_3 307 412 IPR000782 -
Arst10g03193 457 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 16 8 457 IPR044654 -
Arst10g03193 457 Pfam Fasciclin domain 52 185 IPR000782 -
Arst10g03193 457 Pfam Fasciclin domain 291 411 IPR000782 -
Arst10g03193 457 FunFam Fasciclin-like arabinogalactan protein 16 261 412 - -
Arst10g03193 457 SUPERFAMILY FAS1 domain 245 412 IPR036378 -
Arst10g03193 457 ProSiteProfiles FAS1/BIgH3 domain profile. 266 394 IPR000782 -
Arst10g03193 457 SUPERFAMILY FAS1 domain 41 186 IPR036378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g03193 Arst-Chr10 100369493 100372605 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g03193 - - aip:107622999 749.584
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst10g03193 10 100369493 100372605 Arst10g03193 10 100369493 100372605 ECH