Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g02787 ATGGAAAAGGGAAACGGCAGAGAACATTCCCCGCCAAAAATGGCGGCAGAGAGCGACGACATTGAAATCCAAGTCCGAACCCTAACCGCCGAATCCATCACTATCCCAATCCCTGCTTCCGCAACCGTACAACGCCTCAAGCTTCTCCTCAACCATTCATTCCCACCCGCCACCAACTCCTCCCATTTCCACCTTTTCTTCAAGGGTGAGAAATTGAGACCGCAGGCTCAGATTGGATCTTACACAATCCACAATGGGGAGTTTCTTGTACTCGTTCCATTTGCTAAGAAGGATTCCAAAGCTCACAAATCGGACTCACTTAATGCTCCTTCAACTCCCTCTAATGCTGCTTGTGGTGGTGATTCAGCTACCGATCTCGCGGATTCAATGTGGTCTAATATAAAGGAGGATCTATTGCATTTGCGCGAGGCCACTGAAAGTGATACTTTGGATCATGATAATAGCTCTGGTTTCGAGTTCAGGACGGTTGCTTCGGAGCCAAGAAAAGAGAAAGTGGATTATGAGGTCAGTTGGAATCAGGCTTCGAGGGCAAATGACAGAGATGCTGATAACCGGATTGAGCTTCCATATCATCTCATATTGAACACACTTGAGTGTACCAGTGAGGGTGCCCTCGGCAAGCATAATTGCGAGGTCTTTTTGAAGGTTTTGGACTCCGTGAATTGTTTGTCAGACCTGCCTCTGGGACACTGCAAGTTGTTCAGAAGAGCTCGTTCACTGGGAGGTGATGGTGGATTGCAGCTAGGTGCCAATGGTAGTAGTAGTTCATGCTTGTGTCCTGCATGGTTGAAGATTGTAATGAAAGCATTTGCTTTCATAAACATCTTGTCCGGGTTTCTTCATTTGCAGGGTAGGAAAGTGACCTTGCGTCTGCTGGAAGAAGCGTTGAATGAGCTTGGAATGTTCGGAGTCAAAATTGGCCTCCAGGACGTGAAGCATCTTCCGCTTCTCTCACCTCAACTAGTGTGCTTTGAAAGTGACATAGAAAAGGCAAGTTTTGGCAATGTCATTTTTGTCATTAACCATTCATCAAGTGATGAAGAACAAATTGAAATCAATCCTAAAACAGCTCTATCAAAGATTGTTCGGACATTGAAGAGTAGGGATAGTTCTTTCCGAAATAATCTGTGGAAGGCTTTTGAGCAGCTTCCGTTTATTTCAGGAGATCAGCTGACTATGGGAGTTTCCTTGGAAAAATTGCTTGCAATATGCAAAGACCATTATTTTGTTGTAAATGAAAACAAATCAAAACGTTTAAAGAGAAGCTTGAATACCACAAAACCTGATTCAAATCACATTCGGTGTCATGACACAAAGGCACTGCTAGCTGTGGACATGGTTGAACACCTTGAGAAAGGAATTGGATCTGAAGGACAGATTGTGCATATTGAAGACATAGGCCCTAGAAATGCCATTCATGCAGAGATCCCAACTGAACTATCGGAAAAGATGAGATCAGCACTGAAGTGTATAGGAGTTTCAAAATTGTATAGTCACCAGGCAGAGTCTATACAAGCCTCCCTCCATGGGAAGAATGTTGTTGTGGCTACAATGACATCTAGTGGCAAATCTCTTTGCTATAACCTGCCAGTTCTAGAAGTTTTACTGAATAATCTGTCATCATGTGCTCTTTACATATTTCCTACAAAGGCATTAGCTCAAGATCAACTAAGATCTTTGTTAAACATGACAAAAGGATTTGATGTTGAGTTAAATATTGGTATATATGATGGTGACACTTCCCACAGTGACAGGACTTGGCTACGAGACAATTCTAGATTGTTGATAACAAATCCAGATATGTTACACATATCGATCTTGCCCCACCATCGTCGATTTAGTCGGATTTTATCAAATCTAAGGTTTGTGATAATTGATGAAACTCATACTTACAAGGGAGCATTTGGATGTCATACTTCCCTTATATTAAGGAGGCTCAGGCGACTGTGCTCGCATGTATATGGATCTGATCCTTCCTTTGTTTTTTCTACTGCAACTTCTGCTAATCCAAGTGAGCATTCTATGGAACTTGCAAATTTACCAGCACTTGAGCTATTTCAGAATGATGGAAGTCCATCTGCAAGGAAACTTTTCATCCTTTGGAATCCTAGTCTGCATCCGAAAGCTATGGTGAAGAAAGCCAAGTCTGTTATCGATGCTGATAATTTGGAAGACGAAAGTGACAATTTTGTTCGTTCAAGCCCAATTGTGGATGTTTCGCGCCTTTTTGCAGAAATGGTTCAGCATGGTCTTCGCACCATCGCATTTTGTAAATCAAGGAAACTTTGTGAGCTTGTTTTATCATATACACGTGAAATTCTTCTCGAAGCAGCCCCGCATCTGGTTCATTCCATCTGTGCATATCGTGGTGGCTACATCGCAGAGGAAAGAAGAAAAATAGAGACTGCATTTTTTGGTGGTAAAATTTGTGGTGTTGCTGCAACTAATGCTCTTGAATTGGGCATTGATGTTGGAGAAATTGATGTGACTCTGCATCTAGGATTTCCAGGTAGTATTGCAAGCTTGTGGCAACAAGCCGGTAGGGGTGGGAGGAGAGATAGGCCTTCTCTTGCTGTCTATGTTGCCTTTGGTGGGCCTCTTGATCAGTACTTCATGAAACACCCTAAGAAACTTTTTGAAAGGCCAATTGAATGCTGTCACATTGATTCCCAAAACAAGCAGGTTCTTGAACAGCATTTGGCCTGTGCAGCTCATGAACACCCTCTGGCTGTGCAGTATGATGAGAAGTATTTTGGTTCTTGCTTAGAGAATGTTTTAAATTCTCTAAAAGCTAGAGGATATTTGAGTCCTAATCAGTCATCTGATTCTTCTTCTAGAATTTGGAACTACATTGGTAATGAGAAATATCCTTCTCATGCGGTCAATATCCGAGCAATAGAAACCGTAAGATACAGTGTCATAGATCAGAGAAAAAATGAAGTCCTTGAAGAGATAGAGGAAAGCAGGGCTTTCTTTCAGGTATATGAAGGTGCTGTGTACATGTGTCAAGGGAAAACCTATTTGGTCGAGAAATTAGATCTGTCTAGCAAGACCGCTTTCTGCAAAGTGGCTGATCTGAAGTATTATACAAAAACTCGAGATTACACCGATATTCATGTCACTGGGGGTAATATTGCTTATCCTACAGGAGTTTTGAACATGTTTCCTAAAACAAATGCGCGGGCTCATATATGCAAAGTAACAACTACATGGTTTGGTTTTTATCGTATTTGGAGAGGGAGCAATCAAATCTTTGATGCTGTTGACCTAGCCCTTCCTCAATATTCATACGAGTCACAGGCAGTTTGGATTCCAGTGCCACAATCTATCAAAGAAGTAGTACTCAAGAAAAATTATGATTTTCGTGGAGGTTTGCATGCTGCTTCGCATGCGGTTTTAAATGTAGTGCCTTTACACATAACATGCAACTTATCTGACTTGGCTGCCGAGTGCCCGAATCCTCATGATAACCGCTATTACCCAGATCGAATTCTCATTTATGATCAACATCCTGGAGGGTGTGGGATTTCAGTTCAGGTTCAACCGCGTTTCACCAAGTTCCTGGAAGCTGCAATTGATCTTCTCACTTGTTGCCGCTGCTCAGCAGAAGTTGGTTGTCCTAATTGTGTTCAGAGTTTTGCTTGCAATGAGTATAACGAGGTCCTACACAAGGATGCGGCCATTATGATTATCAAGGGTGTTCTGGAAGCAGAAAATGTGATCAATGCTGAGGAGTCACCTTTTTTATGA 3771 0.4219 MEKGNGREHSPPKMAAESDDIEIQVRTLTAESITIPIPASATVQRLKLLLNHSFPPATNSSHFHLFFKGEKLRPQAQIGSYTIHNGEFLVLVPFAKKDSKAHKSDSLNAPSTPSNAACGGDSATDLADSMWSNIKEDLLHLREATESDTLDHDNSSGFEFRTVASEPRKEKVDYEVSWNQASRANDRDADNRIELPYHLILNTLECTSEGALGKHNCEVFLKVLDSVNCLSDLPLGHCKLFRRARSLGGDGGLQLGANGSSSSCLCPAWLKIVMKAFAFINILSGFLHLQGRKVTLRLLEEALNELGMFGVKIGLQDVKHLPLLSPQLVCFESDIEKASFGNVIFVINHSSSDEEQIEINPKTALSKIVRTLKSRDSSFRNNLWKAFEQLPFISGDQLTMGVSLEKLLAICKDHYFVVNENKSKRLKRSLNTTKPDSNHIRCHDTKALLAVDMVEHLEKGIGSEGQIVHIEDIGPRNAIHAEIPTELSEKMRSALKCIGVSKLYSHQAESIQASLHGKNVVVATMTSSGKSLCYNLPVLEVLLNNLSSCALYIFPTKALAQDQLRSLLNMTKGFDVELNIGIYDGDTSHSDRTWLRDNSRLLITNPDMLHISILPHHRRFSRILSNLRFVIIDETHTYKGAFGCHTSLILRRLRRLCSHVYGSDPSFVFSTATSANPSEHSMELANLPALELFQNDGSPSARKLFILWNPSLHPKAMVKKAKSVIDADNLEDESDNFVRSSPIVDVSRLFAEMVQHGLRTIAFCKSRKLCELVLSYTREILLEAAPHLVHSICAYRGGYIAEERRKIETAFFGGKICGVAATNALELGIDVGEIDVTLHLGFPGSIASLWQQAGRGGRRDRPSLAVYVAFGGPLDQYFMKHPKKLFERPIECCHIDSQNKQVLEQHLACAAHEHPLAVQYDEKYFGSCLENVLNSLKARGYLSPNQSSDSSSRIWNYIGNEKYPSHAVNIRAIETVRYSVIDQRKNEVLEEIEESRAFFQVYEGAVYMCQGKTYLVEKLDLSSKTAFCKVADLKYYTKTRDYTDIHVTGGNIAYPTGVLNMFPKTNARAHICKVTTTWFGFYRIWRGSNQIFDAVDLALPQYSYESQAVWIPVPQSIKEVVLKKNYDFRGGLHAASHAVLNVVPLHITCNLSDLAAECPNPHDNRYYPDRILIYDQHPGGCGISVQVQPRFTKFLEAAIDLLTCCRCSAEVGCPNCVQSFACNEYNEVLHKDAAIMIIKGVLEAENVINAEESPFL 1256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g02787 1256 Pfam MrfA Zn-binding domain 1135 1217 IPR018973 -
Arst10g02787 1256 CDD Ubl_ubiquitin_like 23 92 - -
Arst10g02787 1256 Gene3D - 736 928 IPR027417 -
Arst10g02787 1256 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 745 903 IPR001650 -
Arst10g02787 1256 MobiDBLite consensus disorder prediction 105 119 - -
Arst10g02787 1256 MobiDBLite consensus disorder prediction 101 120 - -
Arst10g02787 1256 SUPERFAMILY Ubiquitin-like 18 93 IPR029071 -
Arst10g02787 1256 Gene3D - 476 691 IPR027417 -
Arst10g02787 1256 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 511 692 IPR014001 -
Arst10g02787 1256 Pfam DEAD/DEAH box helicase 505 674 IPR011545 GO:0003676|GO:0005524
Arst10g02787 1256 CDD DEXHc_Hrq1-like 503 684 - -
Arst10g02787 1256 CDD SF2_C_Hrq 705 869 - -
Arst10g02787 1256 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 512 867 IPR027417 -
Arst10g02787 1256 FunFam DEAD/DEAH box helicase 738 887 - -
Arst10g02787 1256 Pfam Helicase conserved C-terminal domain 752 858 IPR001650 -
Arst10g02787 1256 Gene3D - 21 109 - -
Arst10g02787 1256 Pfam Ubiquitin family 23 92 IPR000626 GO:0005515
Arst10g02787 1256 SMART helicmild6 779 860 IPR001650 -
Arst10g02787 1256 ProSiteProfiles Ubiquitin domain profile. 21 92 IPR000626 GO:0005515
Arst10g02787 1256 SMART ultradead3 499 705 IPR014001 -
Arst10g02787 1256 PANTHER ATP-DEPENDENT HELICASE HRQ1 43 1247 - -
Arst10g02787 1256 PANTHER ATP-DEPENDENT HELICASE HRQ1 43 1247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g02787 Arst-Chr10 93910238 93919056 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g02787 - - aip:107623363 2439.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst10g02787 10 93910238 93919056 Arst10g02787 10 93910238 93919056 ECH