Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g02673 ATGGGCATAACAGAAGCATGTTCAAGGTTCATTGTTGACTTCTTGCAAGCATTCAAACACTCATCACCACCAAGCTCAATTCATGATGAGCTTGATCAAAATCACCATAGCCCTGATTGCAAGCCCCAGAATTTGCTAAAGCTCGACGACAACACGGTTCGCGCCCTCATGACTGTGTTTGGCATGCAAAACAATGGAAGAATCAAGAAAGAAAATGCTAGAAGAGTTGTGGAGAAGCTTGGTTTGGTGCATGACAAAGATAATAACAACAAGGCCTCATCATCACCATCAAGATTTGAGCTTCATGGTGATGGTGGATTGTTGGAGGGCGACGAAGTGCCGGTAGAAGAGGTTCTTGGTGATTTGGAGGACATGACAAAGCGCAATGAGCTCTTGCATGAAGCATTCAAGATCTTTGATGAGGATGGAGATGGTTACATTGATGCAATGGAGTTGAAGAGGGTGCTTGATTGTCTTGGTTTGGATAAGGGTTGGGACATGAACACAATTGAGAAGATGGTTAAGGTTGTTGATTTGAATCTTGATGGCAAGGTTGACTTTGGTGAGTTTGAGTTGATGATGGGATAG 588 0.4337 MGITEACSRFIVDFLQAFKHSSPPSSIHDELDQNHHSPDCKPQNLLKLDDNTVRALMTVFGMQNNGRIKKENARRVVEKLGLVHDKDNNNKASSSPSRFELHGDGGLLEGDEVPVEEVLGDLEDMTKRNELLHEAFKIFDEDGDGYIDAMELKRVLDCLGLDKGWDMNTIEKMVKVVDLNLDGKVDFGEFELMMG 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g02673 195 CDD EFh 132 190 IPR002048 GO:0005509
Arst10g02673 195 Pfam EF-hand domain pair 131 194 IPR002048 GO:0005509
Arst10g02673 195 SUPERFAMILY EF-hand 46 194 IPR011992 -
Arst10g02673 195 Gene3D - 113 195 - -
Arst10g02673 195 ProSitePatterns EF-hand calcium-binding domain. 140 152 IPR018247 -
Arst10g02673 195 SMART efh_1 169 195 IPR002048 GO:0005509
Arst10g02673 195 SMART efh_1 131 159 IPR002048 GO:0005509
Arst10g02673 195 FunFam Calmodulin A 103 195 - -
Arst10g02673 195 ProSiteProfiles EF-hand calcium-binding domain profile. 127 162 IPR002048 GO:0005509
Arst10g02673 195 MobiDBLite consensus disorder prediction 86 106 - -
Arst10g02673 195 ProSiteProfiles EF-hand calcium-binding domain profile. 165 195 IPR002048 GO:0005509
Arst10g02673 195 PANTHER EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN 61 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g02673 Arst-Chr10 92163712 92164449 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g02673 132 194 EF-hand Containing Proteins AT4G20780 58.730 1.31e-17 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g02673 - - adu:107470962 387.111