Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g02563 ATGGCGACTTCTTCTTTTTATAAACCATTATTTCTGGTAAAGTGCTCCATCGAGAAAAGACCTTCCTATGTCTCACACAATAATTCTCATCATAATCACTTCAATATACCAATTGCTTCTGCTTTTAAGAAAATGGCGATGATTGGTTTGCCTGAATTCCCGAAAATTGTGGCAACTTCTGCTGTTAGATTGGTTGATGTTTTTGTGGATTCATTCTTTGAATTCATTGATCAGCCATTGCTTCCATCTCAGAATAACTTTGCTCCGGTGGAGGAGTTGGGAGAAACAATGGTTGTGACTAACAACATCGATGGCCATATTCCGAATGGTTTTCCTGAGGGTGTCTACATCAGAAATGGACCAAATCCACTATTTGGAGGACTGAAATCAACAAATTCAATATTTGGGAAGACAAGTCACGTATGGGTGGAAGGAGAGGGAATGCTTCATGCATTGTATTTCAATTATAATAATAATAATAATAATTGGACGGTTCTATACAACAACAGGCACGTTGAAACTGAGACCTACAAGCTTGAAAAACAAAGGAACAAACCATCATTTTTGCCGGCCATTCAAGGCGATTCACTTGCCATTTTGTTTGCATACCTCTTAAATTTGTTGAGATTTGGCAAAGTAAACAAATACATTAGCAACACCAATGTGTTTGAGCATTCAGGCAAGTTTTATTCCGTGGCTGAAAGTCACATCCCACAAGAGATTGACATCTTTACCCTCAAAACCTTAAGGAATTGGGATGTCAATGGAGCCTGGAATAGACCCTTTTGCAGCCACCCAAAGAAAGCCCCAGGTACAGGGGAGCTTGTCACATTAGGAATATCTCCAATTTTACCTTTTTGTGAACTTGGAATAATTTCTGCTGATGGGAAAAAATTGGATCACAAAGTTGATCTCAAACTGAACAGGTGCACCCTTTGCCATGAACTAGGTGTTACACAGAGGTACAATGTAATCATGGATTTTCCACTGACCATTGATCTACTCAGACTTGTTAAAGGAGAGCAACTAATAAGGTATGATAAAGATGAATATGCAAGAATTGGTGTGATGCCACGCTATGGCGATGCAAGCTCAATCAAGTGGTTTGAAGTGGAGCCTAATTGCACCTTCCATATCATCAATTCTTTTGAGGAGGGTCATGAGGTTGTAGTAAGAGGCTGCAGATCTCTTGATTCATTGATTCCTGGACCTCATCCGAGTTCGAATGAATTCGATTGTCTGTCTCGTTGTTACGAATGGCGATTGAACATGGAAACAGGGGAAGTTAAGGAGAGAAGTCTGATCGGACCCAAAGTAGTGTATATGGATTTTCCTATGGTCAATGAAAACTTCATGGGTATCAAGAATAGATATGCATACACACAAGTAGTTGATCCACCTGCAAGCTCTACTCAAGATGTGCCAAAATATGGAGGTCTAGCAAAGCTCTACTTCGAAGAATCATCGAGTGAAAACTTATTTATGGGAGACAAACAACATGATGAAGATCCAATAAGGGTTGAATACCATATGTTTGAGAAGAACACATTTTGCAGTGGAGCTGCTTTTGTACCGAAAGATGGTGGTGTAGAAGAAGATGATGGTTGGATTATCAGTTTTGTTCATAACGAAGATAATGCCATATCTCAAGTTCATATAATTGATGGAAAGAAGTTAAGTGGTGAGGCAGTTGCCAAGATTACATTGCCATGCAGAGTTCCTTACGGTTTCCATGGAGCTTTCATGCCAATCTCTTTTCAGGCGTCTCACTAG 1773 0.3971 MATSSFYKPLFLVKCSIEKRPSYVSHNNSHHNHFNIPIASAFKKMAMIGLPEFPKIVATSAVRLVDVFVDSFFEFIDQPLLPSQNNFAPVEELGETMVVTNNIDGHIPNGFPEGVYIRNGPNPLFGGLKSTNSIFGKTSHVWVEGEGMLHALYFNYNNNNNNWTVLYNNRHVETETYKLEKQRNKPSFLPAIQGDSLAILFAYLLNLLRFGKVNKYISNTNVFEHSGKFYSVAESHIPQEIDIFTLKTLRNWDVNGAWNRPFCSHPKKAPGTGELVTLGISPILPFCELGIISADGKKLDHKVDLKLNRCTLCHELGVTQRYNVIMDFPLTIDLLRLVKGEQLIRYDKDEYARIGVMPRYGDASSIKWFEVEPNCTFHIINSFEEGHEVVVRGCRSLDSLIPGPHPSSNEFDCLSRCYEWRLNMETGEVKERSLIGPKVVYMDFPMVNENFMGIKNRYAYTQVVDPPASSTQDVPKYGGLAKLYFEESSSENLFMGDKQHDEDPIRVEYHMFEKNTFCSGAAFVPKDGGVEEDDGWIISFVHNEDNAISQVHIIDGKKLSGEAVAKITLPCRVPYGFHGAFMPISFQASH 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g02563 590 Pfam Retinal pigment epithelial membrane protein 88 583 IPR004294 GO:0016702
Arst10g02563 590 PANTHER BETA-CAROTENE DIOXYGENASE 96 582 IPR004294 GO:0016702
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g02563 Arst-Chr10 89304362 89310818 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g02563 - - ahf:112717820 1083.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst10g02563 10 89304362 89310818 Arst10g02563 10 89304362 89310818 ECH