Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g02562 ATGGCGACTTCTTCTTTTTATAAACCATTATTTCTGGTAAAGTGCTCCATCGAGAAAAGACCTTCCTATGTCTCACACAATAATTCTCATCATAATCACTTCAATATACCAATTGCTTCTGCTTTTAAGAAAATGGCGATGATTGGTTTGCCTGAATTCCCGAAAATTGTGGCAACTTCTGCTGTTAGATTGGTTGATGTTTTTGTGGATTCATTCTTTGAATTCATTGATCAGCCATTGCTTCCATCTCAGAATAACTTTGCTCCGGTGGAGGAGTTGGGAGAAACAATGGTTGTGACTAACAACATCGATGGCCATATTCCGAATGGTTTTCCTGAGGGTGTCTACATCAGAAATGGACCAAATCCACTATTTGGAGGACTGAAATCAACAAATTCAATATTTGGGAAGACAAGTCACGTATGGGTGGAAGGAGAGGGAATGCTTCATGCATTGTATTTCAATTATAATAATAATAATAATAATTGGACGGTTCTATACAACAACAGGCACGTTGAAACTGAGACCTACAAGCTTGAAAAACAAAGGAACAAACCATCATTTTTGCCGGCCATTCAAGGCGATTCACTTGCCATTTTGTTTGCATACCTCTTAAATTTGTTGAGATTTGGCAAAGTAAACAAATACATTAGCAACACCAATGTGTTTGAGCATTCAGGCAAGTTTTATTCCGTGGCTGAAAGTCACATCCCACAAGAGATTGACATCTTTACCCTCAAAACCTTAAGGAATTGGGATGTCAATGGAGCCTGGAATAGACCCTTTTGCAGCCACCCAAAGAAAGCCCCAGGTACAGGGGAGCTTGTCACATTAGGAATATCTCCAATTTTACCTTTTTGTGAACTTGGAATAATTTCTGCTGATGGGAAAAAATTGGATCACAAAGTTGATCTCAAACTGAACAGGTGCACCCTTTGCCATGAACTAGGTGTTACACAGAGGTACAATGTAATCATGGATTTTCCACTGACCATTGATCTACTCAGACTTGTTAAAGGAGAGCAACTAATAAGGTATGATAAAGATGAATATGCAAGAATTGGTGTGATGCCACGCTATGGCGATGCAAGCTCAATCAAGTGGTTTGAAGTGGAGCCTAATTGCACCTTCCATATCATCAATTCTTTTGAGGAGGGTCATGAGGTTGTAGTAAGAGGCTGCAGATCTCTTGATTCATTGATTCCTGGACCTCATCCGAGTTCGAATGAATTCGATTGTCTGTCTCGTTGTTACGAATGGCGATTGAACATGGAAACAGGGGAAGTTAAGGAGAGAAGTCTGATCGGACCCAAAGTAGTGTATATGGATTTTCCTATGGTCAATGAAAACTTCATGGGTATCAAGAATAGATATGCATACACACAAGTAGTTGATCCACCTGCAAGCTCTACTCAAGATGTGCCAAAATATGGAGGTCTAGCAAAGCTCTACTTCGAAGAATCATCGAGTGAAAACTTATTTATGCAGGGAGACAAACAACATGATGAAGATCCAATAAGGGTTGAATACCATATGTTTGAGAAGAACACATTTTGCAGTGGAGCTGCTTTTGTACCGAAAGATGGTGGTGTAGAAGAAGATGATGGTTGGATTATCAGTTTTGTTCATAACGAAGATAATGCCATATCTCAAGTTCATATAATTGATGGAAAGAAGTTAAGTGGTGAGGCAGTTGCCAAGATTACATTGCCATGCAGAGTTCCTTACGGTTTCCATGGAGCTTTCATGCCAATCTCTTTTCAGGCGTCTCACTAG 1776 0.3975 MATSSFYKPLFLVKCSIEKRPSYVSHNNSHHNHFNIPIASAFKKMAMIGLPEFPKIVATSAVRLVDVFVDSFFEFIDQPLLPSQNNFAPVEELGETMVVTNNIDGHIPNGFPEGVYIRNGPNPLFGGLKSTNSIFGKTSHVWVEGEGMLHALYFNYNNNNNNWTVLYNNRHVETETYKLEKQRNKPSFLPAIQGDSLAILFAYLLNLLRFGKVNKYISNTNVFEHSGKFYSVAESHIPQEIDIFTLKTLRNWDVNGAWNRPFCSHPKKAPGTGELVTLGISPILPFCELGIISADGKKLDHKVDLKLNRCTLCHELGVTQRYNVIMDFPLTIDLLRLVKGEQLIRYDKDEYARIGVMPRYGDASSIKWFEVEPNCTFHIINSFEEGHEVVVRGCRSLDSLIPGPHPSSNEFDCLSRCYEWRLNMETGEVKERSLIGPKVVYMDFPMVNENFMGIKNRYAYTQVVDPPASSTQDVPKYGGLAKLYFEESSSENLFMQGDKQHDEDPIRVEYHMFEKNTFCSGAAFVPKDGGVEEDDGWIISFVHNEDNAISQVHIIDGKKLSGEAVAKITLPCRVPYGFHGAFMPISFQASH 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g02562 591 Pfam Retinal pigment epithelial membrane protein 88 584 IPR004294 GO:0016702
Arst10g02562 591 PANTHER BETA-CAROTENE DIOXYGENASE 96 583 IPR004294 GO:0016702
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g02562 Arst-Chr10 89304362 89310818 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g02562 - - ahf:112717820 1083.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst10g02562 10 89304362 89310818 Arst10g02562 10 89304362 89310818 ECH