Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g02543 ATGGCTTTCTCAGTCTTACCCTCCTCACCATCAATCAGAAGATCCATTTCATATCCAAGAAGCATGGTTGTTTCTAATAAAATGTCTGATAATAAAATTAATAATGTTGGAGAAGGGTTCCTTTCACCTCCAAACAAGGGCATCTACAAAAGCCGACGCTCCCTTCAAGACTTGACCGTTGCGAGTGTTGCGAGTCGTCTACCGCCTCCGTCAGTGGCGGAAGGGCACTGGCACCATAGCGCATGGACTAGTATCCGTCAAGAGAGATGGGAAGGGGAGCTGGTTGTCCAAGGAGAAATACCATTGTGGCTGAAAGGAACATACCTGAGGAATGGGCCAGGCATGTGGCACATTGGAGACTACAACTTCCGGCACCTCTTTGACGGTTACGCCACCCTCGTCAAGCTCCACTTCGAAGACGGCCGGTTAATCGCCGGCCACCGCCAACTGGAGTCACAAGCCTACCAAGCCGCCAAAAAGAACCAAAAGATCTGCTACCGCGAGTTCTCGGAGGTACCAAAGGCGGAGAACTTCCTGGCATACGTGGGAGAATTGGCGAGCCTGTTCTCCGGCGCATCCCTGACGGACAACGCCAACACCGGAGTGGTGAGGCTCGGCGACGGCAGGGTGGTGTGCCTGACGGAGACACAGAAGGGGTCTATCGTGATAGACCCCGAAACACTGGAGACTAAGGGAAAATTCTGCTACAGCGATTCTTTGGGGGGTTTGATTCACTCGGCGCATCCGATTGTGACGGAGGAGGAGTTCTTGACTCTGTTGCCGGATCTGGTGAAGCCTGGCTACGTGGTGGCAAGAATGGAGAAGGGAAGTAATGAGAGGAAGGTGATTGGAAGAGTCAACTGTAGGGGTGGCCTGCAGAATTATGTTGTTGTTCCCGAAATGCCCTTGAGGTACTCTGCTCAGAATCTTCTTAAGGCTGAGCCTACCCCTTTGTACAAGTTCCGCTGGTACCCTCACAACAATGCTTACATGCATGTCATGTGCAAGGCCACTGGCAAGATTGTGGCAAGTGTGGAGGTGCCTCTGTTTGTTCAGTTCCATTTCATAAATGCATATGAAGAGAAAGATGAAGATGGAAGAGTTACGGCGATAATCGCCGACTGTTGTGAGCACAATGCAAATACCGACATTCTTGAGAAGCTCAGACTAAACAACCTTCGTTCCTATAATGGTGAAGATGTTCTACCCGACGCTAGGGTTGGTCGATTCCGAATACCTTTTGATGGGAGTCCATATGGAACCTTGGAGGCAGCATTAGATCCAAATGAACATGGGAGAGGCATGGACATGTGCACCATAAACCCTAATTATTTAGGAAAGAAATATAGATATGCTTATGCTTGTGGAGCACATCGCCCTTGTAACTTTCCCAACACCATCACCAAGATTGATTTTGAGTTGAAAAAGGCTAAGAACTGGTATGAAGAAGGTACTGTGCCCTCGGAACCATTCTTTGTAGCTCGGCCGGGTGCAATCGAAGAAGACGATGGCGTGGTAATCTCAGTAGTTAGTGAGAAAAATGGAGGAGCATATGCGTTGGTGTTAGATGGTTCCACTTTTCAAGAGATTGCTAGGGCCAAGTTCCCTTATGCAATTCCATATGGGTTGCATGGATGCTGGGTTCCAAAAAATTAG 1656 0.4897 MAFSVLPSSPSIRRSISYPRSMVVSNKMSDNKINNVGEGFLSPPNKGIYKSRRSLQDLTVASVASRLPPPSVAEGHWHHSAWTSIRQERWEGELVVQGEIPLWLKGTYLRNGPGMWHIGDYNFRHLFDGYATLVKLHFEDGRLIAGHRQLESQAYQAAKKNQKICYREFSEVPKAENFLAYVGELASLFSGASLTDNANTGVVRLGDGRVVCLTETQKGSIVIDPETLETKGKFCYSDSLGGLIHSAHPIVTEEEFLTLLPDLVKPGYVVARMEKGSNERKVIGRVNCRGGXLQNYVVVPEMPLRYSAQNLLKAEPTPLYKFRWYPHNNAYMHVMCKATGKIVASVEVPLFVQFHFINAYEEKDEDGRVTAIIADCCEHNANTDILEKLRLNNLRSYNGEDVLPDARVGRFRIPFDGSPYGTLEAALDPNEHGRGMDMCTINPNYLGKKYRYAYACGAHRPCNFPNTITKIDFELKKAKNWYEEGTVPSEPFFVARPGAIEEDDGVVISVVSEKNGGAYALVLDGSTFQEIARAKFPYAIPYGLHGCWVPKN 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g02543 552 Pfam Retinal pigment epithelial membrane protein 85 550 IPR004294 GO:0016702
Arst10g02543 552 PANTHER BETA-CAROTENE DIOXYGENASE 81 550 IPR004294 GO:0016702
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g02543 K17913 - gmx:100794831 884.789
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst10g02543 10 88804925 88810124 Arst10g02543 10 88804925 88810124 ECH