Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g02537 ATGGATGACGCCGGAAACATTCCAAACTCCGGCAACCCATCGCACAAGGCCATCGCCGTCACTGCCGGGGAAGCGCACACTCTCCTTCTTACTGGGGATGGGAGTGTGTACTCATGGGGAAGAGGAATGTTTGGGAGGCTTGGCCATGGTTCAGAAAAGGATGAGCTTTTACCAGTTCAGGTCAAGTTTCAGAACCCTAATGGAGGAGAAGCAGACACACCCAAAATTGTTGCTATTGCTTCTGGTGCATATCATAATCTTGCTCTTGCAGATGACGGGTCCGTTTGGAGTTGGGGTTACAATATTTATGGTCAACTTGGCACGGACGGAGAGGATACACCTGATGAAAATTCTATTGGTGGAGTTTATAACCTAGCGCCCCACTTATTGAATAAGTTTCCCAAGTCGCACCCACTTGATTCTTCAACTGGTGTCTCTGAAGTAGAAGGAAAAGGATCAATTAAGATACATGCTGTCAAAGCAGGAGGAATGATGTCTATGGCTATTGATAATCGTGGCACCCTCTGGATGTGGGGAAACTGCCCACAAGAAAGCAAAGGTGAATTCTCTCTTGTAAGTAGTTTCATTCCAATGCCAATACTGGCCTTTCATGGCCTTAATGTTGCCAAGGTTGCATGTGGAAATGAGCATGTTGTAGCATTGGTTAGTGCCGGAGAATCAAACAATGGTGAAGATTTGGTCTGCTACTCTTGGGGTTTTAACAACCATGGCCAGTTAGGATTGGGGGATAGGGAGAACAGGGCACATCCAGAAGTTGTGAAAACATTTGGTGAGGAGTCCCCTTGGACAATTTATGACATAGCATGTGGTGCTGCTCACACTGCCTTGCTCACTCGCAAAAAGAAATCTACCGAGTTGGAAAGCAAGTGCTGGACTTTTGGCCTTGGGGATAATGGCCAACTCGGGCATGGAACAACACAAAGCGCATTATTTCCTACACCTGTTCAAGACTTGCCGCAAGATATATCTCTTATTGGTATCGATTGCGGCTTGTTTCATACAAGTGTGGTTTCCTCATCAGGGGATGTGTGGTCATGGGGAATGGAGAAGGGTCTTGGCTTATGCCCTGATGCTGGTCGTGGTTCATCAGATTCTGGTGATGCCCTCTCACCCTTGCTTAAACCGTGTGCTCCATACCAACCTAAGTTTCCAGATCCGGTTCAAGTTGCATGTGGAGCTGCACATACTGTTATTGTTGCGCGGGATGGATATAAGGTGTGGTCTTGGGGTAGGGGGCGATGTGGAGTTCTTGGAACTGGTAACGAATTGGATTGTTATACTCCCACCAAGGTGCGGTGGCCTCCAGCGACCGAAGATTCAGAGGAAGAGGAATCAAAGAGCTCCCTCGAGCAGGACAGAGAGAAAGAAAAGGAGGCCGAAGTAAAAACAGAAACAGATGAGAAATTATCCTCGGCACTGAATGAGCTGAAGCAGCTTCAATTGAAGCTATCCACAATGGAACAATATGCTAGCATACTTCATGGTTGTGTTTTCGGAAAACCTTTTGCTGAGCAAGATGTCCCTGCTTCATTGAAGGATTCAGGTTCATTCAACATTGCAAAAGAATGGGAGAACATGTTGGAGACTGCAGATCATAGGACGCTAATGAGGTTGGAAATGTTCTACCGGGACATGCTTGCTGGTGTGAAAGATAAACAAATGAAGAGGAGGATCAAGGAAATTGTAAAGGAGTGCCTCCAATCACCGGAGCGGAAAAATTAG 1743 0.4659 MDDAGNIPNSGNPSHKAIAVTAGEAHTLLLTGDGSVYSWGRGMFGRLGHGSEKDELLPVQVKFQNPNGGEADTPKIVAIASGAYHNLALADDGSVWSWGYNIYGQLGTDGEDTPDENSIGGVYNLAPHLLNKFPKSHPLDSSTGVSEVEGKGSIKIHAVKAGGMMSMAIDNRGTLWMWGNCPQESKGEFSLVSSFIPMPILAFHGLNVAKVACGNEHVVALVSAGESNNGEDLVCYSWGFNNHGQLGLGDRENRAHPEVVKTFGEESPWTIYDIACGAAHTALLTRKKKSTELESKCWTFGLGDNGQLGHGTTQSALFPTPVQDLPQDISLIGIDCGLFHTSVVSSSGDVWSWGMEKGLGLCPDAGRGSSDSGDALSPLLKPCAPYQPKFPDPVQVACGAAHTVIVARDGYKVWSWGRGRCGVLGTGNELDCYTPTKVRWPPATEDSEEEESKSSLEQDREKEKEAEVKTETDEKLSSALNELKQLQLKLSTMEQYASILHGCVFGKPFAEQDVPASLKDSGSFNIAKEWENMLETADHRTLMRLEMFYRDMLAGVKDKQMKRRIKEIVKECLQSPERKN 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g02537 580 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 233 287 IPR000408 -
Arst10g02537 580 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 348 409 IPR000408 -
Arst10g02537 580 Gene3D - 231 487 IPR009091 -
Arst10g02537 580 Gene3D - 4 230 IPR009091 -
Arst10g02537 580 Coils Coil 469 496 - -
Arst10g02537 580 PANTHER REGULATOR OF CHROMOSOME CONDENSATION 151 489 - -
Arst10g02537 580 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 93 172 IPR000408 -
Arst10g02537 580 MobiDBLite consensus disorder prediction 435 473 - -
Arst10g02537 580 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 295 347 IPR000408 -
Arst10g02537 580 Pfam Regulator of chromosome condensation (RCC1) repeat 297 343 IPR000408 -
Arst10g02537 580 Pfam Regulator of chromosome condensation (RCC1) repeat 236 284 IPR000408 -
Arst10g02537 580 Pfam Regulator of chromosome condensation (RCC1) repeat 413 442 IPR000408 -
Arst10g02537 580 Pfam Regulator of chromosome condensation (RCC1) repeat 92 169 IPR000408 -
Arst10g02537 580 Pfam Regulator of chromosome condensation (RCC1) repeat 33 89 IPR000408 -
Arst10g02537 580 PRINTS Chromosome condensation regulator RCC1 signature 406 427 IPR000408 -
Arst10g02537 580 PRINTS Chromosome condensation regulator RCC1 signature 35 51 IPR000408 -
Arst10g02537 580 PRINTS Chromosome condensation regulator RCC1 signature 95 111 IPR000408 -
Arst10g02537 580 PRINTS Chromosome condensation regulator RCC1 signature 211 227 IPR000408 -
Arst10g02537 580 PRINTS Chromosome condensation regulator RCC1 signature 337 355 IPR000408 -
Arst10g02537 580 SUPERFAMILY RCC1/BLIP-II 17 356 IPR009091 -
Arst10g02537 580 MobiDBLite consensus disorder prediction 442 473 - -
Arst10g02537 580 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 173 224 IPR000408 -
Arst10g02537 580 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 34 92 IPR000408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g02537 Arst-Chr10 88721281 88725107 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g02537 - - gmx:100815199 825.854
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst10g02537 10 88721281 88725107 Arst10g02537 10 88721281 88725107 ECH