Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g02477 ATGGGTAGCAGTACTACTACACAAAGATCACATTGTTGGCATTATTGGGGCATCATTGTAGCATGGCTTACATTGTTGGAAATGAAGATGATGGTGCATTATGTGAATGGTGAACTCAATTACAAGGAGGCTCTCACCAAGTCATTAATATTTCTAGAGGCACAAAGATCAGGAAAACTCCCTTCCAATAACAGGGTACCTTGGAGGGAAGACTCAGCCCTAGATGATGGAAAACTAGCTAATGTGGACCTTGTTGGAGGTTACTATGATGCTGGGGATAATGTAAAATATGGCCTCCCAATGGCTTTTACTATTACAACCCTATCATGGGCTGCAATTTTTTACAAATCAGAATTAGAAGCTACAAAGGAAATGGGGAATGTTCATGATGCCATTAGATGGGGCACTGATTATTTTCTCAAAGCTAGTTCTAGACGCAAAAGATTATATGTCCAGGTAGGGGACCCGGAAGAGGATCACCATTGTTGGGTTCGACCGGAAAATATGAAGACAAAAAGAACGGTTTTGAAGATTGATAGTAACACGCCAGGGACTGAGATTGCAGCTGAAACCGCCGCGGCAATGGCGGCTGCTTCTATCGTTTTTAGGGACTCTGATCGTAAATATTCACATAGTCTCCTAAACAAAGCGAAATCGCTTTTTGTGTTTTCGAAATCACACAAAGGAACCTATGATGGAGAGTGTCCCTTCTACTGCTCTTACTCAGGCTATAATGATGAACTTATGTGGGCAGCAACATGGTTATACATGGCTACGAGGAAGCCTGCGTATTTGAAGTACATAGAAGAAGAATCGATAAGTGCTAGCGTAACAGAATTTAATTGGGATCTTAAATATGCAGGAGCCCAAATCCTTCTTACCAAGTTACATTTTGAAGGAACAAAGAATTTGGACACATTCAAAGTTCATGCCGAAAGTTTCATATGTTCAGTTCATCCGGAAAGTCCCTATCATCAAATTAACTTATCCCCTGGTGGGTTCGTTCATTTGAGAGATGGTGCCAACACACAATATGCTACCGGGGCAGCATTGTTGTTCACTGTGTATGGTGATTTGCTTGCCAAACATAAACAGAAAATCACTTGCGGAGACAAACAATTTGATCCCTCTCACCTCCTCTCCTTTGCTAAGATACAAATGGATTATATACTAGGGAAGAACCCTGAAGGAAGATCATACATGGTAGGGTTTGGGAAGAACCCACCAACACAAGCTCACCATAGAGGTGCATCCATGCAAAAGTTGCCAAAGGATGAAGAAGTAAACTGTCCCACGAGCTTCTCAAAATGGTTGAATAAAGACCAACCTAACCCCAATGAGCTCACCGGTGCTATTCTTGGTGGACCTGACGGCAATGACAAGTTCAAAGACAAGCGTTGGGAATCTGTTTACACTGAGCCATGCACATACATTAATTCTCTAGCAGTTGGACCTTTAGCCAAGCTTGCATCTTTGTCTTAA 1482 0.4204 MGSSTTTQRSHCWHYWGIIVAWLTLLEMKMMVHYVNGELNYKEALTKSLIFLEAQRSGKLPSNNRVPWREDSALDDGKLANVDLVGGYYDAGDNVKYGLPMAFTITTLSWAAIFYKSELEATKEMGNVHDAIRWGTDYFLKASSRRKRLYVQVGDPEEDHHCWVRPENMKTKRTVLKIDSNTPGTEIAAETAAAMAAASIVFRDSDRKYSHSLLNKAKSLFVFSKSHKGTYDGECPFYCSYSGYNDELMWAATWLYMATRKPAYLKYIEEESISASVTEFNWDLKYAGAQILLTKLHFEGTKNLDTFKVHAESFICSVHPESPYHQINLSPGGFVHLRDGANTQYATGAALLFTVYGDLLAKHKQKITCGDKQFDPSHLLSFAKIQMDYILGKNPEGRSYMVGFGKNPPTQAHHRGASMQKLPKDEEVNCPTSFSKWLNKDQPNPNELTGAILGGPDGNDKFKDKRWESVYTEPCTYINSLAVGPLAKLASLS 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g02477 493 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 389 415 IPR018221 -
Arst10g02477 493 PANTHER ENDO-1,4-BETA-GLUCANASE 27 491 - -
Arst10g02477 493 Pfam Glycosyl hydrolase family 9 41 484 IPR001701 GO:0004553|GO:0005975
Arst10g02477 493 SUPERFAMILY Six-hairpin glycosidases 39 491 IPR008928 GO:0005975
Arst10g02477 493 Gene3D - 36 493 IPR012341 GO:0005975
Arst10g02477 493 FunFam Endoglucanase 37 493 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g02477 Arst-Chr10 86794487 86796577 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g02477 35 491 Glycoside Hydrolase AT3G43860 71.616 0.0 675
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g02477 K01179 - gmx:100811509 787.334
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst10g02477 10 86794487 86796577 Arst10g02477 10 86794487 86796577 ECH