Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g02453 ATGATGATGAGTCGCAGCCACTGCCACACTGAAGCTCAGTTCTGTTTTCCCGAACACGACTATGACGACGATGATTTCCACCTCCCTCTTACGCAGACCACACTTGCCCCTTCCAATCCTCACCGTCCATCCAAGAAGCTCAAGCACAAGTCAACGACCACACATCACTTCGGCAAGGAGAACGTTCCCCCTTACGACACTGACTTTAATATTGAAAACTGCAGCTTGGATTGCATCCCTTCCACCATAGATTGTGCCACCGTTTGTCATTCCCAACAGCAAAACGACGTCGTTCCCTCGTGCTCCGCGGAGTCCCAGGGCCTGAAGAAGAAAACCAACTGCGCGTACTTCCGAAACTCGATAGAGTCCAAGCTGGTGGCGTTGGGACCACACGCGCGGCTCAGCCACGGATCTGGAAAACCTATGGATGATAATGATGATGATGATTCGGACCTCGATCTGTTGCTGAATTTGTGCAATGAGTTAGATGAAGATGAAAGATCTAGGATGATGCCGCGTGTTGATGGCGTTGGAGGTTCTGTTCTTTGTCCACTGTGTGATGTTGATATCTCTAGCTTCAGTGAGGAACAGCGACACCTTCACACCAATCATTGCCTTGACAGAGTGGAAGATCAAGCTCAAGATGTTGCAGTTCGTGATGGCGAGAATGATGGAGTGGGTGCTCAATTGGAGCCAGAGCCGAAGCCGAAAGTTGCCAATGTTTCTGCGGTTGTTGATTGGCTGCGCAGTATCGGCTTAGCGAAATACGAAGATATTTTTGTGAGGGAAGAAGTTGATTGGGACACCTTGCAGTGGCTGAAAGAAGAGGATCTATTAAGCATTGGTATTACTGCACTTGGTCCCAGAAAAAAGATTGTGCATGCTCTTTATGAACTTAGAAAAGGAACTGGCCGTTCAGATGAGAAACATGAGGATGCTATTGCAGAGCCTAGAAGGAGTGGAAACCAGAAAGTCAAATTGCAACGTGAAAAATCTGAAAAGAAAGTTTATGGCACAACTAAACCAGTGACAAACAAATTGATTACTGAATATTTTCCTGGCTCTGCTGGCAATGGGAAGAAAGCACCTGCGGCTTCAGGAGAACAGCTGGAAACAAAAAACAGTACCTTGGATTCTGGCCATAAAAGCAAGGCAAAAAATACGTCTACAAATAGAAAACTTCGTGATGTTCCCCAATGGTGTAGCATTCCTGGAACGCCTTTTCGGGTGGATGCTTTCAAATATCTCAGAGGAGATTGTTCTCACTGGTTTCTCACACACTTCCATTTAGACCATTATCAAGGTCTCACAAAGTCGTTCAGTCATGGAAAGATCTATTGCTCTTCTATTACCGCTAGCCTTGTAAATATAAACATTGGGATTGCCTATGATAAAATACATGTTTTGCCTCTGAACGAGAAGGTCTCAATAGACGGTGTTGATGTGACCTGCTTGGATGCCAACCATTGTCCGGGTTCGATAATCATCCTCTTTCAACCTCCGAATGGTAAGGCGGTTCTCCATACTGGGGATTTTCGGTACAGTGAAGAAATAGCAAACAATCCTTTTCTCCGGATGTGTCGTATCCATACTCTAATTCTTGATACAACATATTGTAACCCACAGTATGACTTTCCAAAACAAGAAGCTGTCATACAATTTGTTATTGATGCCATTCAAGCGGAGGCTTTTAATCCCGAGACCCTTTTTCTGATTGGCAGCTATACTATTGGAAAAGAAAGGCTATTCTTGGAGGTTGCTCGCACACTTCGTAAGAAGGTTTACGTGACAGCGGCAAAGTTGCGTCTTCTAAAATGTTTGGGATTTAGGGAGGAGGATATGCGGTGGTTTACATTAAATGAGCACGAAAGCAACATTCACGTTGCTCCTATGTGGACACTTGCAAGTTTCAAAAGATTGAAACACATATCAAGTCAATATGCGGGTCGGTTCAGTCTTATAGTTGCTTTCTCTCCCACTGGTTGGACATTTGGCAAAGGTAAAAAGAAGTCTCCTGGAAGAAGATGGCAGCAGGGTACTATTATAAGGTATGAAGTGCCATACAGTGAGCATTGCAGCTATGCAGAACTCAAAGAGTTTGTGAAACTTATATCCCCTGATAACATTATACCAAGTGTTAATAACGACGGACCAGAATCCGTCGATGCCATGATTTCTCTCATGTTGCCTTGA 2193 0.4451 MMMSRSHCHTEAQFCFPEHDYDDDDFHLPLTQTTLAPSNPHRPSKKLKHKSTTTHHFGKENVPPYDTDFNIENCSLDCIPSTIDCATVCHSQQQNDVVPSCSAESQGLKKKTNCAYFRNSIESKLVALGPHARLSHGSGKPMDDNDDDDSDLDLLLNLCNELDEDERSRMMPRVDGVGGSVLCPLCDVDISSFSEEQRHLHTNHCLDRVEDQAQDVAVRDGENDGVGAQLEPEPKPKVANVSAVVDWLRSIGLAKYEDIFVREEVDWDTLQWLKEEDLLSIGITALGPRKKIVHALYELRKGTGRSDEKHEDAIAEPRRSGNQKVKLQREKSEKKVYGTTKPVTNKLITEYFPGSAGNGKKAPAASGEQLETKNSTLDSGHKSKAKNTSTNRKLRDVPQWCSIPGTPFRVDAFKYLRGDCSHWFLTHFHLDHYQGLTKSFSHGKIYCSSITASLVNINIGIAYDKIHVLPLNEKVSIDGVDVTCLDANHCPGSIIILFQPPNGKAVLHTGDFRYSEEIANNPFLRMCRIHTLILDTTYCNPQYDFPKQEAVIQFVIDAIQAEAFNPETLFLIGSYTIGKERLFLEVARTLRKKVYVTAAKLRLLKCLGFREEDMRWFTLNEHESNIHVAPMWTLASFKRLKHISSQYAGRFSLIVAFSPTGWTFGKGKKKSPGRRWQQGTIIRYEVPYSEHCSYAELKEFVKLISPDNIIPSVNNDGPESVDAMISLMLP 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g02453 730 SUPERFAMILY Metallo-hydrolase/oxidoreductase 408 712 IPR036866 -
Arst10g02453 730 MobiDBLite consensus disorder prediction 33 59 - -
Arst10g02453 730 FunFam DNA cross-link repair 1A protein 544 691 - -
Arst10g02453 730 Pfam DNA repair metallo-beta-lactamase 613 716 IPR011084 -
Arst10g02453 730 Gene3D - 403 713 IPR036866 -
Arst10g02453 730 MobiDBLite consensus disorder prediction 303 336 - -
Arst10g02453 730 MobiDBLite consensus disorder prediction 354 391 - -
Arst10g02453 730 Pfam SAM domain (Sterile alpha motif) 240 299 IPR001660 GO:0005515
Arst10g02453 730 CDD SNM1A-1C-like_MBL-fold 388 541 - -
Arst10g02453 730 CDD SAM_superfamily 244 298 - -
Arst10g02453 730 PANTHER DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1-RELATED 392 724 - -
Arst10g02453 730 FunFam DNA ligase 6 403 561 - -
Arst10g02453 730 SMART SAM_4 236 302 IPR001660 GO:0005515
Arst10g02453 730 Gene3D - 234 304 IPR013761 -
Arst10g02453 730 SUPERFAMILY SAM/Pointed domain 238 302 IPR013761 -
Arst10g02453 730 ProSiteProfiles SAM domain profile. 239 302 IPR001660 GO:0005515
Arst10g02453 730 Gene3D - 544 691 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g02453 Arst-Chr10 86245711 86249651 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g02453 242 296 Glycosyltransferase AT3G07170 45.455 2.98e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g02453 K15340 - gmx:100816321 932.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst10g02453 10 86245711 86249651 Arst10g02453 10 86245711 86249651 ECH