Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g02441 ATGGAACATTCTAGAGATTGGAATGGTCAAGGTAGAAGTCTAAAGAGAAAATCACAAGAAAATGGAGATCATAAACTCCTCAATAACTTTTCTCTTGATGACCTCAATGAGGATCTGTTTGAAAGGATACTTTCATGGCTTCCAACTTCCACATTCTTTCGCCTTACTTCCGTGTCGAAACGGTGGAATTCGGTTGCTGATTCGGCTAGTTTCAAGCTTGCCTGCTCAAGCATTCCTTCCAGGGATCCTTGGTTCTTCATGGTTGCTCCCAACCTTAACCAATCTATAATCTTTGACTCTGCTGAAAGAACTTGGAAAAGACTCAATCACCCCCCACTTTTACATCAAGATTCTAACAAAGGTTGTATGCCGGTTGCTGCCTCCGGTGGCTTGATTTGCTACCGTAATTCATCAGGAAGCTTCATTGTAAGCAACCCTGTGACAGGAACTTGTAGTGAACTCCCTCTGCTTGAGTTTTCCCCTCAAAATCAACCACTCAATGCAATTGTGATGAGCACAACCACCAAAGACCAACAACTATACTACAAAATTGTGTTAGTCTTCGGAGAACTTCAGAATCTTGTGTTTAGAGTCTACAATTCTTTCTCTGGAAGTTGGGAAGGTGAGACTGCTCTAAGGAGAAAGGTTGATGATTGTTCTATGGAGTTTGATTCGACCGAGGACGACAATGTTGTATACTTCCTTAGTAAGGCTGGCATTGTGGTAGCAAGCAACATGCAGAGAAGCCCTTCAAAGCAATATTCGTCGGTCATTACCGACAAAAATGGCGAAGAGATTGTCTATTTTCTTAGCTCCACAGGGACAATCGTAGCTTGCAACCTGACAAGCAAGTGCTACATCGAGTATCCAAGGTTGTTGCCTGTTCTGAGTGAGTATTCAATTGATGTTGTGGAGTGTAATGGGGAGATGCTAGTTGTTCTGTTATCGGAGTTCTTGGAAACCGCGAGTCTTCGTGTGTGGAAGTATGATGAAGCTAAAAGAGGGTGGCACCAGATTGCAGCAACGCCTGCATCAATTTCTCATGAATGGTATGGGAAGAAAGTGGATATTAACTGTGTAGGCGCTGGTAACCAGATATTCATATGCTTGAACTCCTCTGAGCTATGTACTTATGTTCTGTGTGATTTGGTTAGCAACAACTGGGTTGAATTGCCAAATTGTTGCATAAATGGTGAAGTCATAGACTTTATGTCTTCATTTTCATTTGAGCCGAGGATAGAGGCTTCTGTATGA 1254 0.4242 MEHSRDWNGQGRSLKRKSQENGDHKLLNNFSLDDLNEDLFERILSWLPTSTFFRLTSVSKRWNSVADSASFKLACSSIPSRDPWFFMVAPNLNQSIIFDSAERTWKRLNHPPLLHQDSNKGCMPVAASGGLICYRNSSGSFIVSNPVTGTCSELPLLEFSPQNQPLNAIVMSTTTKDQQLYYKIVLVFGELQNLVFRVYNSFSGSWEGETALRRKVDDCSMEFDSTEDDNVVYFLSKAGIVVASNMQRSPSKQYSSVITDKNGEEIVYFLSSTGTIVACNLTSKCYIEYPRLLPVLSEYSIDVVECNGEMLVVLLSEFLETASLRVWKYDEAKRGWHQIAATPASISHEWYGKKVDINCVGAGNQIFICLNSSELCTYVLCDLVSNNWVELPNCCINGEVIDFMSSFSFEPRIEASV 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g02441 417 Gene3D - 26 72 - -
Arst10g02441 417 SMART fbox_2 35 75 IPR001810 GO:0005515
Arst10g02441 417 CDD F-box_AtFBW1-like 33 71 - -
Arst10g02441 417 ProSiteProfiles F-box domain profile. 29 74 IPR001810 GO:0005515
Arst10g02441 417 SUPERFAMILY F-box domain 26 87 IPR036047 GO:0005515
Arst10g02441 417 SUPERFAMILY Galactose oxidase, central domain 95 394 IPR011043 -
Arst10g02441 417 PANTHER BNACNNG10540D PROTEIN 16 416 - -
Arst10g02441 417 Pfam F-box domain 32 71 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g02441 Arst-Chr10 85863097 85865167 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g02441 - - gmx:100777105 674.855