Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g02407 ATGATGTTGAAGCCATCGTCGTGCTTCTACTACTCCTCTCTTCTCCTCCTTCTAACGGCGGCAGCGTTCGTCATCGTCCTCGCCACCGTCACCTACGACGGCAGATCCTTAATCATTGATGGCCAACATAGAATCTTATTCTCCGGTTCTATTCACTATCCTCGCAGCACTCCTGAGATGTGGCCTGATTTAATCACAAAAGCTAAAGAAGGAGGGTTAGATGTCATACAAACTTACGTCTTTTGGAACCTTCATGAGCCTCAACAAGGACAGTACGACTTTAGTGGAAGACGTGATTTAGTGAGATTCATTAAGGAAATTCAAGCACAAGGCTTATATGTAACCCTTCGAATTGGACCCTACATTGAGAGTGAATGGACTTATGGGGGTCTACCATTGTGGTTACATGACATTCCGGGTATTACTTTTAGAACTGATAACAATCAATATAAGTTTCACATGCAAAGGTTCGCTGCCAAAATAGTCAACATGATGAAATCAGCCAATCTTTATGCTTCTCAAGGAGGGCCTATAATACTTTCTCAGATTGAAAATGAATATGGAAATGTTGAAAAGGCTTATCATGAGCAAGGAAGCTCCTATATTCGTTGGGCTGCTCAAATGGCCGTTGGACTCCATACTGGGGTGCCTTGGGTTATGTGCAAGCAAGATGATGCCCCTGATCCAATGATAAATGCTTGCAATGGCATGAAGTGTGGAAAAGCATTTAAGGGTCCAAACTCTCCTAACAAGCCTTCTATATGGACAGAGAATTGGACTAGTTTTTATCAAGCCTTTGGAGAAAAGCCATATCTAAGATCAGCAGAAGACATTGCATATAATGTTGCTCTGTTCATTGCTAAGAAAGGAAGCTATGTCAATTATTACATGTACCATGGAGGAACCAATTTTGACAGAACGGCATCTGCTTATATAATAACGGCTTATTATGATGAAGCTCCATTGGATGAATATGGATTGGTTAGGCAACCAAAATGGGGTCATCTAAAGGAGCTACATGCTGCAATCAAGTCATGTTCAGACACTTTACTAAATGGAACTCAAAGCATAATCACTTTGGGTTCCCAGCAACAAGCTTATGTTTTCAGAAGGAGCTCAAAGGAATGTGCTGCCTTCCTGGAAAATAGTGGTGGAAAGGAATCCACAGTCAAATTTCAGAACATTCCATATGTATTGCCCCCAAGATCAATCAGCATTCTACCAGATTGCAAGAAAGTAACCTTCAATTCAGGCAAGGTAAGCACACAAAACTATGCCAGAGTGAGAGCAATGATACCACAGTTGAAGTTCAATACAGCTGAAAGATGGAAAGTATATACAGAAGCCATCCCTAACTTTGATGATACAACATTAAGAGCAAATAAACTATTAGACCAAATCAGCACAGTAAAAGATACATCTGATTACTTGTGGTACACTTTTAGGTTTAATGACAAAGCTCCTATTGTTCAATCCTTGCTTAGTGTATTAAGTCAAGGGCATGTTTTGCATGCATTCATCAATGGAGTTTTAGTAGGCTCTGCACATGGGACACATGACAGTAGATCTTTTGTCACAGAATGCAAAGTAAATCTGACAAATGGGATGAACGTCTCCTTACTAAGTGCAACTGTTGGAATGCCTGCTTCAGGAGCATATCTAGAGAGCAAAGTTGCTGGTTTGCGTTCGGTAAAAGTTCAAGGCAGAGATTTCACTAATCAAGCATGGGGATATCAGGTTGGCCTGCAAGGAGAGAAACTGCAAATCTATACAGATATTGGATTAAGTAAAGTTCAGTGGGGAAGTTTTCAAAGTTCTGTGAAACCACTCACATGGTACCAGACTACATTTGATGCACCAGCAGGCAAAGATCCTGTAGTGCTTAACCTTGGTTCTATGGGAAAGGGAGAAGCTTGGGTTAATGGCCAAGGTATTGGTCGATATTGGTTATCTTTTCACACAGAAAACGGGGATCCTTCACAAACATGGTATCATATACCACGATCCCTCCTAAAATCTACTGGGAATCTACTAGTTCTATTTGAAGAAGAAACTGGGAACCCACTAGAAATTACTCTAGACACAGTTATATATAAGTGA 2100 0.4071 MMLKPSSCFYYSSLLLLLTAAAFVIVLATVTYDGRSLIIDGQHRILFSGSIHYPRSTPEMWPDLITKAKEGGLDVIQTYVFWNLHEPQQGQYDFSGRRDLVRFIKEIQAQGLYVTLRIGPYIESEWTYGGLPLWLHDIPGITFRTDNNQYKFHMQRFAAKIVNMMKSANLYASQGGPIILSQIENEYGNVEKAYHEQGSSYIRWAAQMAVGLHTGVPWVMCKQDDAPDPMINACNGMKCGKAFKGPNSPNKPSIWTENWTSFYQAFGEKPYLRSAEDIAYNVALFIAKKGSYVNYYMYHGGTNFDRTASAYIITAYYDEAPLDEYGLVRQPKWGHLKELHAAIKSCSDTLLNGTQSIITLGSQQQAYVFRRSSKECAAFLENSGGKESTVKFQNIPYVLPPRSISILPDCKKVTFNSGKVSTQNYARVRAMIPQLKFNTAERWKVYTEAIPNFDDTTLRANKLLDQISTVKDTSDYLWYTFRFNDKAPIVQSLLSVLSQGHVLHAFINGVLVGSAHGTHDSRSFVTECKVNLTNGMNVSLLSATVGMPASGAYLESKVAGLRSVKVQGRDFTNQAWGYQVGLQGEKLQIYTDIGLSKVQWGSFQSSVKPLTWYQTTFDAPAGKDPVVLNLGSMGKGEAWVNGQGIGRYWLSFHTENGDPSQTWYHIPRSLLKSTGNLLVLFEEETGNPLEITLDTVIYK 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g02407 699 FunFam Beta-galactosidase 296 422 - -
Arst10g02407 699 SUPERFAMILY Galactose-binding domain-like 575 696 IPR008979 -
Arst10g02407 699 SUPERFAMILY Galactose-binding domain-like 404 555 IPR008979 -
Arst10g02407 699 Gene3D Glycosidases 26 347 - -
Arst10g02407 699 Gene3D - 565 697 - -
Arst10g02407 699 PRINTS Glycosyl hydrolase family 35 signature 310 326 IPR001944 GO:0004553|GO:0005975
Arst10g02407 699 PRINTS Glycosyl hydrolase family 35 signature 635 651 IPR001944 GO:0004553|GO:0005975
Arst10g02407 699 PRINTS Glycosyl hydrolase family 35 signature 40 57 IPR001944 GO:0004553|GO:0005975
Arst10g02407 699 PRINTS Glycosyl hydrolase family 35 signature 173 188 IPR001944 GO:0004553|GO:0005975
Arst10g02407 699 PRINTS Glycosyl hydrolase family 35 signature 61 79 IPR001944 GO:0004553|GO:0005975
Arst10g02407 699 PRINTS Glycosyl hydrolase family 35 signature 291 306 IPR001944 GO:0004553|GO:0005975
Arst10g02407 699 PRINTS Glycosyl hydrolase family 35 signature 116 135 IPR001944 GO:0004553|GO:0005975
Arst10g02407 699 PRINTS Glycosyl hydrolase family 35 signature 254 269 IPR001944 GO:0004553|GO:0005975
Arst10g02407 699 PRINTS Glycosyl hydrolase family 35 signature 608 622 IPR001944 GO:0004553|GO:0005975
Arst10g02407 699 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 175 187 IPR019801 GO:0004553|GO:0005975
Arst10g02407 699 Pfam Glycosyl hydrolases family 35 36 342 IPR031330 -
Arst10g02407 699 FunFam Beta-galactosidase 578 699 - -
Arst10g02407 699 PANTHER BETA-GALACTOSIDASE RELATED 24 696 IPR001944 GO:0004553|GO:0005975
Arst10g02407 699 Pfam Beta-sandwich domain in beta galactosidase 350 420 IPR041392 -
Arst10g02407 699 SUPERFAMILY (Trans)glycosidases 29 346 IPR017853 -
Arst10g02407 699 FunFam Beta-galactosidase 26 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g02407 Arst-Chr10 85123135 85131469 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g02407 14 696 Glycoside Hydrolase AT5G63800 58.883 0.0 879
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g02407 - - gmx:100789220 1132.47