Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g02311 ATGGACAGCCTCTGGCCAATAATTTTGTCCAGTGAGGAAGTTGCTGTAAGGATGTACAGTAACATGGTTACACTACAAATTATGGACACCATTTTCTATGAAGCGCAAAGGCAGGGCAGAATATCTTTTTATGCAACGACCATTGGAGAAGAGGCAATAAATATTGCATCAGCTGCAGCTCTTACTAGGGATGATGTTATTTTCCCTCAGTATAGGGAACCAGGACCCCTGTTATGGCGTGGTTTCACATTGCAAGAAATTGCACACCAGTGTTTTTCCAATAAATATGACAATGGAAAAGGACGGCAAATGCCAATACATTATGGGTCCAACAAGCATAATTACTTTACTGTAGCATCAACTGTTGCCACACAAGTTCCCCATGCTGTTGGAGCTGCATATTCTTTAAAGATGGACAAAAAAGATGCATGTTCTATCACTTACTTTGGTGATGGTGGCTCAAGTGAGGGAGATTTCCATGCTGCCTTAAATTTTGCAGCAGTTATGGAGGCGCCAGTTATTTTCCTGTGCCGAAACAATGGATGGGCTATCAGCACCCCAACTTCGGATCAATTTCGAAGTGATGGTGTTGTCGTGAAAGGACAGGCATATGGAGTCCGCAGCATTCGAGTAGATGGCAACGACGCCCTGGCCATTTATAATGCTGTTCAAGCTGCTCGTGAAATGGCAATCAGTGAAGAGAGACCAGTTCTAATAGAAGCTCTTACATATAGAGTAGGACACCATTCGACATCGGATGACTCCACCAAGTATCGTCCAGCCAATGAGATTGAATGGTGGAGGCTCGCTCGAGATCCGGTGGCTAGGTTTAGAAAGTGGATAGAAAGGAATGGTTGGTGGAATGACATGGCTGAATCAGAGCTTAGGAACAGTCTGAGACAGCAGCTTCTGCATTCAATTCAAGTGGCAGAGAATATAGAGAAGCCTCCAATTGAAGATATATTTAACGATGTTTATGATGTGCCTCCGTCCAATCTTCGTGAGCAGGAGCAATGGGTCAAAGATACCATAAAAAAGCATCCGTTAGATTACCCAGAGAATATTTCTGCATAG 1074 0.4358 MDSLWPIILSSEEVAVRMYSNMVTLQIMDTIFYEAQRQGRISFYATTIGEEAINIASAAALTRDDVIFPQYREPGPLLWRGFTLQEIAHQCFSNKYDNGKGRQMPIHYGSNKHNYFTVASTVATQVPHAVGAAYSLKMDKKDACSITYFGDGGSSEGDFHAALNFAAVMEAPVIFLCRNNGWAISTPTSDQFRSDGVVVKGQAYGVRSIRVDGNDALAIYNAVQAAREMAISEERPVLIEALTYRVGHHSTSDDSTKYRPANEIEWWRLARDPVARFRKWIERNGWWNDMAESELRNSLRQQLLHSIQVAENIEKPPIEDIFNDVYDVPPSNLREQEQWVKDTIKKHPLDYPENISA 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g02311 357 PANTHER 2-OXOISOVALERATE DEHYDROGENASE SUBUNIT ALPHA, MITOCHONDRIAL 11 355 - -
Arst10g02311 357 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 11 351 IPR029061 -
Arst10g02311 357 Pfam Dehydrogenase E1 component 21 318 IPR001017 GO:0016624
Arst10g02311 357 CDD TPP_E1_PDC_ADC_BCADC 18 310 - -
Arst10g02311 357 FunFam 2-oxoisovalerate dehydrogenase subunit alpha 7 357 - -
Arst10g02311 357 Gene3D - 8 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g02311 Arst-Chr10 81935167 81937935 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g02311 11 195 Acyl Lipid Metabolism Gene Families AT5G09300 84.865 2.37e-117 342
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g02311 K00166 - gmx:100779198 607.446
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst10g02311 10 81935167 81937935 Arst10g02311 10 81935167 81937935 ECH