Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g02297 ATGGAATCGGAGAAAACAAACTTTCAAAGCGTGACGATAGGATCATGTGCAAGACCCTCATGGTCCATCCTCTTTCTCCTCTTTACCCTCATCACCATCTTCTCCATTCAGCTCTCCACCACCACTCCCTACCTCTTTCCTCCCAACTGGGCCCTCATTCGCCCGCAACGATCCGTCCCTTCCTCCTCCGCATCGGATCCGATCACATGCTCCGGTTTCTTCAGGGCGCTTCCAAAGAGGAAGCTCGTCATGTCCATCAAGGACTTCGGCGGCGTCGGCGACGGCAAAACATCCAATACCGAAGCCTTCAGGAGAGCCATTCGCTACATGCAGCGCTTTCAACACCGTGGTGGGTCCCAGCTTAATATCCCTAACGGAACTTGGCTCACCGCTCCCTTCAATCTCACCTCTGATTTCACCCTTTTCTTGAACCAAGGTGCTCTTCTTTTGGCCTCTCAGGACGTAAAAGAATGGCCTATAATTGAGCCGTTGCCATCTTATGGAAGAGGAAGAGAGAGGTTAGGAGGAAGACATATTAGCCTTATACATGGAAATGGCATCAAGAATGTTATCATCACAGGAGATAATGGGACAGTTGATGGTCAAGGGAAGATGTGGTGGGAACTTTGGTGGAACAGAACATTGGAGCACACAAGAGGCCACCTCCTTGAACTAATTAACTCCGATAATGTTCTCATATCAAACCTCACCTTTCGAAATTCTCCTTTTTGGACCATTCATCCTGTTTACTGCAGAAATGTTGTGATCAAAGGGATGACAATCTTGGCTCCTCTTAATGCCCCAAATACCGATGGCATAGACCCAGACTCAAGCACCAACGTATGCATAGAAGATAACTACATAGAAAGTGGAGATGATCTAGTAGCCATCAAGAGTGGTTGGGATCAATATGGAATCACCATGGCGCATCCTAGCACAAATATCATAGTGAGGAGAGTCTCAGGCACAACCCCAACTTGTTCCGGAGTTGGAATAGGCAGTGAGATGTCCGGAGGAATTTCGAATATCACAATTGAGGATCTACATGTGTGGGATTCTGCAGCTGGTGTTCGGGTGAAATCCGATAAGGGTAGAGGTGGCTATATATCCAATGTTAGCATAACGGATGATGGGTGGGATCCAAATGCTGTTCCAATATTTAAGGACATCTCTATAAGCAACATTGTGAGTGTGAATTCGACCAAAGCACCGGTTTTAGAAGGTATAGAGGGGTCATCATTTGAAGGCTTATGCTTCAAGAATATCACACTGCATGGAATTGCCGCATCCACAAAATGGCATTGTGAATATGTATCTGGTTTTGCCACTAAGGTGTTTCCTGTTCCATGCCCCGATTTAAAGAACACTAGCAGTGATTCATCATGGTGTTCACCTTCTTGA 1401 0.464 MESEKTNFQSVTIGSCARPSWSILFLLFTLITIFSIQLSTTTPYLFPPNWALIRPQRSVPSSSASDPITCSGFFRALPKRKLVMSIKDFGGVGDGKTSNTEAFRRAIRYMQRFQHRGGSQLNIPNGTWLTAPFNLTSDFTLFLNQGALLLASQDVKEWPIIEPLPSYGRGRERLGGRHISLIHGNGIKNVIITGDNGTVDGQGKMWWELWWNRTLEHTRGHLLELINSDNVLISNLTFRNSPFWTIHPVYCRNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDNYIESGDDLVAIKSGWDQYGITMAHPSTNIIVRRVSGTTPTCSGVGIGSEMSGGISNITIEDLHVWDSAAGVRVKSDKGRGGYISNVSITDDGWDPNAVPIFKDISISNIVSVNSTKAPVLEGIEGSSFEGLCFKNITLHGIAASTKWHCEYVSGFATKVFPVPCPDLKNTSSDSSWCSPS 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g02297 466 Gene3D - 75 444 IPR012334 -
Arst10g02297 466 SMART pbh1 312 334 IPR006626 -
Arst10g02297 466 SMART pbh1 278 310 IPR006626 -
Arst10g02297 466 SMART pbh1 228 250 IPR006626 -
Arst10g02297 466 SMART pbh1 340 361 IPR006626 -
Arst10g02297 466 SMART pbh1 251 277 IPR006626 -
Arst10g02297 466 SMART pbh1 364 388 IPR006626 -
Arst10g02297 466 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 16 - -
Arst10g02297 466 Pfam Glycosyl hydrolases family 28 180 373 IPR000743 GO:0004650|GO:0005975
Arst10g02297 466 PANTHER PECTIN LYASE-RELATED 375 459 - -
Arst10g02297 466 SUPERFAMILY Pectin lyase-like 79 452 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g02297 Arst-Chr10 81737512 81741223 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g02297 1 464 Glycoside Hydrolase AT4G33440 62.551 0.0 607
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g02297 - - ahf:112715929 932.554
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst10g02297 10 81737512 81741223 Arst10g02297 10 81737512 81741223 ECH