Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g02253 ATGAGAGGAACAATGGGAAATTCTCCTCATGCTGTTGAACCTCGACACCGTTTGCCTACAACCATTGAAGATTTATACAAACGAAGATTGCCAAAAAATAACAAAGCAAAAGAGGTAGAGAAACCATTCCATTTAACTGTACAAGATAGGAGCTCAAGATGCAAGTTCTCATTCTTAAAGCTTCTGTTATTGGTAACCATTTGTGGAACTTTTGTAACACTCCTCTACTCTCCAGAGGTCTACAATACCACCCATTTAACAACCTCTGGCTCTGTGTGGTTATGGGGTGGGTCGGATCCTAGATATATCGCGAATGTAGATACTCGTTTGAGTGATATTGCGAAAATCACCAAGAAATTAACAGGGAAAGATAAAGTTCAGGGCATTGGGCTTGTGAATTTCAACAAGACAGAGATAAGTGGTTTTGAGAATCTTAATCCTGATGCCACACATGTTGAATTGAACTTGGAGTATGCTGCAAGAAATGTGACATGGGAGAGCCTATACCCCGAATGGATCGATGAGGAAGAAGAGGAGGAAGTTCCCGTTTGCCCCTCTCTGCCAAGTCTGAGGTCTCCCGGCATACGACTTAATCTCATCGCCGTCAAGCTTCCTTGCCGGAAAGGTGTTGGCAAGAATTGGTCTAGAGATGTTGCTCGTTTGCATCTTCAGCTCGCCGCGGCTCGCCTTGCAGCCTCTTTTAAAGGAAACTACACTGTGCATGTTCTCTTTGTTACCGATTGCTTCCCAATGCCGAATCTGTTTACCTGCAAAGAACTTGTTGGACGCGAAGGAAATGCATGGTTATACAGGCCAAACTTGAGTGTTTTGAGACAAAAGGTTCAACTTCCTGTAGGATCCTGTGAACTCACAATTCCTATGAGGGGCAAAGAGTTGGTTTACAATGGAAATGCTGAGAGAGAAGCGTACGCAACAATTCTGCATTCAGCACATGTTTATGTGTGTGGAGCAATCGCGGCAGCGCAAAGCATCCGCATGGCCGGATCAAGTCGAGACCTTGTTATACTTGTTGATGAGACAATAAGTGGATATCACAGAAGTGGTTTGGAAGCAGCAGGGTGGAAAGTCAGGACAATAAAGAGGATCAGAAACCCCAAAGCCGAAAAGGATGCTTACAATGAATGGAACTACAGCAAGTTCCGCTTATGGCAACTAACAGATTATGACAAGATAATATTCATAGATGCAGATTTGCTCATACTAAGAAACATAGATTTCCTCTTTGGCATGCCGGAAATCACTGCTACTGGAAACAATGCCACGCTTTTCAACTCTGGAGTCATGCTGGTTGAGCCATCAAATTGCACATTCCAGCTCCTAATGGATCACATAAACGAGATTGAATCTTACAATGGAGGAGACCAGGGATACCTGAATGAGATATTCACATGGTGGCATAGGATTCCAAGACACATGAACTTCTTGAAGCATTTCTGGATCGGCGACGAAGAAGAGAAGAAAAAAATGAAAACCTTGTTGTTTGGTGCCGAGCCTCCAATCCTCTATGTTCTTCACTACCTAGGCTTGAAGCCTTGGTTATGCTTCCGCGACTATGATTGCAACTGGAACTTTGACATATTCCATGAGTTTGCGAGCGACGTTGCGCACGCCAAGTGGTGGAAGGTGCATGATGCAATGCCTGAGGTTCTGCAACAATTCTGTTTGCTGCCATCAAAGCAAAAGGCTCAGTTAGAATGGGATCGGAGACAAGCCGAGACAGCAAACTACACAGATGGTCACTGGAGACTCAAAATTAAAGATCCTCGGTTGAAGAAATGTATCGATAACTTGTGCCATTGGAAGAGCATGTTGAGGCACTGGGGAGAGACAAATTGGACTGATGATGAGTCTTACCATCCAACACCACCTGCCATTACTACATCATCTCTTTCTGCTTTGTAA 1923 0.4405 MRGTMGNSPHAVEPRHRLPTTIEDLYKRRLPKNNKAKEVEKPFHLTVQDRSSRCKFSFLKLLLLVTICGTFVTLLYSPEVYNTTHLTTSGSVWLWGGSDPRYIANVDTRLSDIAKITKKLTGKDKVQGIGLVNFNKTEISGFENLNPDATHVELNLEYAARNVTWESLYPEWIDEEEEEEVPVCPSLPSLRSPGIRLNLIAVKLPCRKGVGKNWSRDVARLHLQLAAARLAASFKGNYTVHVLFVTDCFPMPNLFTCKELVGREGNAWLYRPNLSVLRQKVQLPVGSCELTIPMRGKELVYNGNAEREAYATILHSAHVYVCGAIAAAQSIRMAGSSRDLVILVDETISGYHRSGLEAAGWKVRTIKRIRNPKAEKDAYNEWNYSKFRLWQLTDYDKIIFIDADLLILRNIDFLFGMPEITATGNNATLFNSGVMLVEPSNCTFQLLMDHINEIESYNGGDQGYLNEIFTWWHRIPRHMNFLKHFWIGDEEEKKKMKTLLFGAEPPILYVLHYLGLKPWLCFRDYDCNWNFDIFHEFASDVAHAKWWKVHDAMPEVLQQFCLLPSKQKAQLEWDRRQAETANYTDGHWRLKIKDPRLKKCIDNLCHWKSMLRHWGETNWTDDESYHPTPPAITTSSLSAL 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g02253 640 Pfam Glycosyl transferase family 8 314 520 IPR002495 GO:0016757
Arst10g02253 640 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 305 555 IPR029044 -
Arst10g02253 640 CDD GT8_Glycogenin 308 553 - -
Arst10g02253 640 PANTHER GLYCOGENIN SUBFAMILY MEMBER 214 600 - -
Arst10g02253 640 FunFam Hexosyltransferase 305 557 - -
Arst10g02253 640 SUPERFAMILY Nucleotide-diphospho-sugar transferases 308 553 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g02253 Arst-Chr10 80097877 80101290 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g02253 13 640 Glycosyltransferase AT3G18660 65.062 0.0 862
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g02253 K20890 - gmx:100809361 1159.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst10g02253 10 80097877 80101290 Arst10g02253 10 80097877 80101290 ECH