Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g02199 ATGGTCATGGGAAACTCGGGGAATTTAGATGCGGCCATAGAGAAGTTGTTGAATGAAGAGAAGCATGGGAGGCTCGCCGGGGACGTTGCCGTCACAAGGAAGGCCGTCACCGATATTCTCCGGCTCTGCCTTGAGGCGCGAGACTGGAAAACTCTCAACGACCAGATTGTTCTCTTGTCCAAACGACGTGGTCAGCTTAAGCAGGCTGTCACAGTAATGGTCCAGCAGGCAATGCAATATATTGATGAAACACCAGATATTGAAACACGTATAGAACTCATCAAAACCTTGAACAGTGTATCTGCAGGGAAGATATATGTTGAGATTGAGAGAGCTCGATTGGTCAAAAAACTTGCCAAGATTAAGGAGGAACAAGGGCTTATAGCTGAAGCTGCTGATTTGATGCAAGAAATTGCGGTGGAAACTTTTGGTGCCATGGCAAAAACTGAGAAAATTGCTTTCATTCTTGAACAAGTTCGTTTGTGCCTAGACCGTCAAGATTATGTTCGTGCACAAATACTTTCAAGAAAAATTAGTACGAGAGTATTTGATGCTGATGCTTCAAAGGAAAAGAAAAAACCTAAAGAAGGTGATAGTGTTGTTGAAGAAGCTCCTGCTGATATACCATCTCTGCCAGAGTTGAAGCGGATGTATTACGAATTAATGATTCGGTATTATTCCCACAAAAATGATTATCTTGAAATTTGTCGTTGCTACAAGGCAATATACGAAATTCCATCTGTCAAAGAAAATCCTGCCGAGTGGATTCCAATCCTGAGGAAAATATGTTGGCACTTGGTTCTAGCACCACATGATCCAATGCAATCAAGTCTTCTCAATTCCACCTTGGAGGATAAGAATCTGTCTGAGATTCCAAACTTTAAATTACTGTTGAAACAGTTGGTCACCATGGAGGTTATTCAATGGACAAGCCTTTGGGATGCATACAAGAATGAGTTTGAAAATGAAAAGAATCTTGGAAAGTCTTTGGGTGAAAAAGCAGCAGAAGATCTGAAGGAAAGAATAATTGAACATAATATTATTGTCGTATCAAAGTACTATGCAAGGATTACTTTGAAGAGACTTGCAGAGCTTTTGTGTCTCAGTGTTCAGGAAGCTGAAAAGCATCTGTCAGACATGGTTGTGTCCAAGGCACTGGTTGCAAAGATTGATAGGCCCACCGGAATAGTTTGTTTCCAGACTGCTAAGGATAGCAATGACATTCTCAACTCATGGGCAGCAAACTTAGAGAAATTGCTTGATCTTGTGGAGAAAAGTTGTCATCAGATACACAAAGAAACTATGATTCATAAAGCTGCTTTGAAGGCTTAA 1332 0.4092 MVMGNSGNLDAAIEKLLNEEKHGRLAGDVAVTRKAVTDILRLCLEARDWKTLNDQIVLLSKRRGQLKQAVTVMVQQAMQYIDETPDIETRIELIKTLNSVSAGKIYVEIERARLVKKLAKIKEEQGLIAEAADLMQEIAVETFGAMAKTEKIAFILEQVRLCLDRQDYVRAQILSRKISTRVFDADASKEKKKPKEGDSVVEEAPADIPSLPELKRMYYELMIRYYSHKNDYLEICRCYKAIYEIPSVKENPAEWIPILRKICWHLVLAPHDPMQSSLLNSTLEDKNLSEIPNFKLLLKQLVTMEVIQWTSLWDAYKNEFENEKNLGKSLGEKAAEDLKERIIEHNIIVVSKYYARITLKRLAELLCLSVQEAEKHLSDMVVSKALVAKIDRPTGIVCFQTAKDSNDILNSWAANLEKLLDLVEKSCHQIHKETMIHKAALKA 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g02199 443 FunFam 26S proteasome non-ATPase regulatory subunit 12 329 408 - -
Arst10g02199 443 ProSiteProfiles PCI domain profile. 234 404 IPR000717 -
Arst10g02199 443 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 333 419 IPR000717 -
Arst10g02199 443 Pfam PCI domain 292 400 IPR000717 -
Arst10g02199 443 Pfam 26S proteasome regulatory subunit RPN5 C-terminal domain 406 438 IPR040896 -
Arst10g02199 443 Gene3D - 329 408 IPR036388 -
Arst10g02199 443 SUPERFAMILY "Winged helix" DNA-binding domain 331 409 IPR036390 -
Arst10g02199 443 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 12/COP9 SIGNALOSOME COMPLEX SUBUNIT 4 6 437 IPR040134 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g02199 Arst-Chr10 77317306 77323928 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g02199 K03035 - gmx:100793755 797.349
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst10g02199 10 77317306 77323928 Arst10g02199 10 77317306 77323928 ECH