Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g02156 ATGTCGTTGTCCTCCTCCTCCTCCTCCTCCTCCTCAGAATCGGAATCAGAACCTCCGACGGGCATATGCCTGATCCCCTCCCTACCTGATGACGTGGCACTGAACTGCCTAGCACGCATCCCTAGGCCCTACCACCCCGTCCTCTCCCTTGTCTCGAAGCCCATCCACTCCCTTTTCTCCTCCCCTCACTTTTACCAGGCCCGCTTTCTTCTTAACTCCACCCAACACCACCTCTACCTCACGCTCCGCTCACGCGCCTCCACCCTCCTCTGGTTCACTCTCCATCGAACCCCGTCCCGCATCCTCCTCGTCCCGCTCCCCTCTCAACCCTCCCCCGCTATCGGCTCTGCCTACGCCGTTCTCGGCTCCACCATTTACGTCATCGGCGGCTCCATTAACGACGTTCCCTCTTCTCACATCTGGCTCCTCGACTGCCGCTTCCACCGATGGCGACGTGGACCCTCTATGCGCGTCGGCCGCGAGTTCGCCGCTGCGGGAGTCGTCGACGGAAAGATTTACGTCATCGGAGGCTGCGTCGCTGACAATTGGGCCAGGTCGGCCAACTGGGCGGAGGTTCTTGACCCCGCCTCCGAGAAATGGGAGCGCGTGGCGAGCCCCGCGGAGGTTCGGGAGAAGTGGATGCACGCAAGCGCCGTAGTGGACGGCAAGGTGTACGCCATGGCGGATCGCGGCGGCATCGCGTTGGATCCCCGATGCGGCGCTTGGGAGAGCGTGGGAACGGAGCTGGACCTCGGGTGGCGAGGGAGGGCGTGCGTGGTGGATGATATTCTTTATTGCTACGATTACTTGGGGAAGATTAAAGGGTTCGATGTGAAGAGTGGGGTATGGAAAGAGCTGAAGGGGTTGCATAAGGGGTTGCCTCGGTTTCTGTGTGGTGCTACCATGGCTGATTTGGGTGGGAAGTTGGTTGTGGTGTGGGAGTGTGGTGGTGGGAATGGGAAAGACATGGACATTTGGTGTGCTGAGATTCAAGTTAGCAAGAAGAATGGTGAACTGTGGGGTGAGGTTGATTGGTTTCAGAAGGTTCTTTCTGTTCCCAAAGGCTCTTCTATTGTGCACTGTTCTTCAGTTGCTTTGTGA 1101 0.5858 MSLSSSSSSSSSESESEPPTGICLIPSLPDDVALNCLARIPRPYHPVLSLVSKPIHSLFSSPHFYQARFLLNSTQHHLYLTLRSRASTLLWFTLHRTPSRILLVPLPSQPSPAIGSAYAVLGSTIYVIGGSINDVPSSHIWLLDCRFHRWRRGPSMRVGREFAAAGVVDGKIYVIGGCVADNWARSANWAEVLDPASEKWERVASPAEVREKWMHASAVVDGKVYAMADRGGIALDPRCGAWESVGTELDLGWRGRACVVDDILYCYDYLGKIKGFDVKSGVWKELKGLHKGLPRFLCGATMADLGGKLVVVWECGGGNGKDMDIWCAEIQVSKKNGELWGEVDWFQKVLSVPKGSSIVHCSSVAL 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g02156 366 Gene3D - 72 345 IPR015915 GO:0005515
Arst10g02156 366 SMART kelc_smart 171 222 IPR006652 GO:0005515
Arst10g02156 366 SMART kelc_smart 124 170 IPR006652 GO:0005515
Arst10g02156 366 Pfam Kelch motif 162 205 IPR006652 GO:0005515
Arst10g02156 366 Pfam Kelch motif 116 157 IPR006652 GO:0005515
Arst10g02156 366 CDD F-box_AtAFR-like 24 68 - -
Arst10g02156 366 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP4 6 350 - -
Arst10g02156 366 SUPERFAMILY Kelch motif 88 332 IPR015915 GO:0005515
Arst10g02156 366 SUPERFAMILY F-box domain 17 84 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g02156 Arst-Chr10 74895427 74896976 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g02156 28 350 Miscellaneous Gene Families AT4G33900 37.110 3.73e-60 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g02156 - - aip:107604821 735.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst10g02156 10 74895427 74896976 Arst10g02156 10 74895427 74896976 ECH