Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g02119 ATGGCGAAGCAGAAACAGAGCAGCACTTATTTGTTTTACTCGGCAATTCTTCTATTCACCATCTTCTGTGTCTCCTCTGTTTTGGTTTCAGCTAGAGTTCATCCTATCTTGCAGAGCTTTAACCAGAAACCCATTTTCCGATCCAACTTCCACTCCATCTATGATACCTCCAACTATGGCACCTTTCAACTCAGTAATGGCTTGGCCAAAACGCCTCAAATGGGATGGAATAGCTGGAACTTCTTTGCATGCAATATCAATGAGACCGTCATTAAGGAAACCGCTGATGCACTGATATCGACGGGATTAGCAGATTTGGGTTATGTGTACGTCAACATAGATGATTGCTGGTCTTCTGTGACAAGAAATTTGAAGGGTCAACTGGTACCTGACGAAAAAACATTCCCATCAGGAATCAAAGCTCTTGCAGATTATGTACATGAAAAGGGACTGAAGCTTGGTATATATTCCGATGCTGGGGCGTTTACTTGTCAAGTCCGACCAGGATCGATTTTCCATGAAAAGGATGATGCAGCTTTGTTTGCCTCTTGGGGTATAGATTACCTGAAATATGACAATTGTTACAATCTGGGCATCCCACCCAAAAAAAGATATCCACCAATGCGTGATGCTCTCAATGCTACTGGACGTACAATTTTCTATTCACTTTGTGAATGGGGTGTTGATGACCCTGCCTTATGGGCTGGCACTGTTGGTAACAGTTGGCGCACAACTGAAGACATCAATGATACTTGGGCAAGTATGTCAAACATTGCTGATCTCAATGACAAGTGGGCCGCATATGCGGGTCCTGGCGGATGGAATGACCCAGATATGTTGGAAGTTGGAAATGGCGGCATGACTTACCAAGAATACCGTGCTCATTTCAGCATCTGGGCTTTAATGAAGGCTCCTCTATTGATTGGTTGTGATGTAAGAAATATGACTATTGAGACAATTGAGATTTTGACCAACAAAGAAGTCATTGACATAAATCAAGATCCACTTGGTGTCCAAGGAAGGAAAGTTTATGTTTCTGGAAAAGATGGTTGCAATCAGGTTTGGGCTGGTCCTTTATCAGGAGACCGGTTGGCAGTGGCACTCTGGAACCGGTGCTCAAATGCAACTACGATAACTGCTTCATGGAATACGATTGGACTGGAATCTGGAATTCGAGTATCTGTAAGGGATTTATGGCAGCACAAGACACTAACATCAGATGCAGTGTCATCATTCAGTGCTCATGTTGATGCTCATGATTGTCATTTTTACATTTTCACTCCTTCTCCTTCAGTGTCTCACTCTGTAGAGTAG 1314 0.4315 MAKQKQSSTYLFYSAILLFTIFCVSSVLVSARVHPILQSFNQKPIFRSNFHSIYDTSNYGTFQLSNGLAKTPQMGWNSWNFFACNINETVIKETADALISTGLADLGYVYVNIDDCWSSVTRNLKGQLVPDEKTFPSGIKALADYVHEKGLKLGIYSDAGAFTCQVRPGSIFHEKDDAALFASWGIDYLKYDNCYNLGIPPKKRYPPMRDALNATGRTIFYSLCEWGVDDPALWAGTVGNSWRTTEDINDTWASMSNIADLNDKWAAYAGPGGWNDPDMLEVGNGGMTYQEYRAHFSIWALMKAPLLIGCDVRNMTIETIEILTNKEVIDINQDPLGVQGRKVYVSGKDGCNQVWAGPLSGDRLAVALWNRCSNATTITASWNTIGLESGIRVSVRDLWQHKTLTSDAVSSFSAHVDAHDCHFYIFTPSPSVSHSVE 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g02119 437 CDD GH27 72 334 IPR002241 GO:0004553|GO:0005975
Arst10g02119 437 Gene3D - 337 429 IPR013780 -
Arst10g02119 437 FunFam Alpha-galactosidase 64 336 - -
Arst10g02119 437 SUPERFAMILY (Trans)glycosidases 64 335 IPR017853 -
Arst10g02119 437 FunFam Alpha-galactosidase 337 429 - -
Arst10g02119 437 Gene3D Aldolase class I 64 336 IPR013785 -
Arst10g02119 437 Pfam Alpha galactosidase C-terminal beta sandwich domain 350 425 IPR041233 -
Arst10g02119 437 Pfam Alpha galactosidase A 71 334 IPR002241 GO:0004553|GO:0005975
Arst10g02119 437 SUPERFAMILY Glycosyl hydrolase domain 347 427 - -
Arst10g02119 437 ProSitePatterns Alpha-galactosidase signature. 107 123 IPR000111 GO:0004553|GO:0005975
Arst10g02119 437 PRINTS Glycosyl hydrolase family 27 signature 143 164 IPR002241 GO:0004553|GO:0005975
Arst10g02119 437 PRINTS Glycosyl hydrolase family 27 signature 269 288 IPR002241 GO:0004553|GO:0005975
Arst10g02119 437 PRINTS Glycosyl hydrolase family 27 signature 102 117 IPR002241 GO:0004553|GO:0005975
Arst10g02119 437 PRINTS Glycosyl hydrolase family 27 signature 66 85 IPR002241 GO:0004553|GO:0005975
Arst10g02119 437 PRINTS Glycosyl hydrolase family 27 signature 177 194 IPR002241 GO:0004553|GO:0005975
Arst10g02119 437 PRINTS Glycosyl hydrolase family 27 signature 204 222 IPR002241 GO:0004553|GO:0005975
Arst10g02119 437 PRINTS Glycosyl hydrolase family 27 signature 290 311 IPR002241 GO:0004553|GO:0005975
Arst10g02119 437 PANTHER ALPHA-GALACTOSIDASE/ALPHA-N-ACETYLGALACTOSAMINIDASE 17 428 IPR002241 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g02119 Arst-Chr10 73179363 73185540 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g02119 1 435 Glycoside Hydrolase AT3G56310 69.725 0.0 635
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g02119 K07407 - gmx:100784072 744.962