Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g01990 ATGGACAACTCCTCCCAAGAATCCCAGCTCCGATCCGATAACTCCGCTACCTATGACTCCACTTACCCTCTGTACGCCATGGCCCTCTCCTCCTCTTCCACTTCTTCCAACCACCAACGCATCGCCGTCGGAAGCTTCATCGAAGAATACACAAACCGCGTTGACATCCTCTCCTTCAACCCCGAAACCCTAACCCTAAGGCCCAACCCTTCTCTCTCCTTCGACCACCCTTACCCTCCCACAAAGCTCATGTTCCACCCCTCCACCCCCTCCTCCCTTCTCCGCCACTCCGCCGTCGACCTCCTCGCCACCTCCGGTGACTACCTCCGCCTCTGGGAGGTCCGCGAATCCTCCGTCGAGGCCCTCTCCCTCTTCAACAACAGCAAGACCAGCGAGTTTTGCGCCCCTCTCACCTCCTTCGATTGGAACGACATCGATCCCAAACGCATCGGAACCTCAAGCATCGATACCACCTGCACAATCTGGGACATCGAAAAGGGCGTCGTTGAAACGCAGCTCATTGCGCACGATAAAGAGGTTTACGACATTGCTTGGGGTGAAGCCCGTGTCTTCGCTTCAGTCTCCGCTGATGGATCTGTTCGAATCTTCGATTTGAGGGATAAGGAGCACTCCACCATCATCTACGAGAGCCCCCAGCCCGATACGCCATTGCTGCGTTTGGCGTGGAACAAGCAGGATTTGAGGTACATGGCGACCATCTTGATGGACAGTAATAAAGTTGTGATATTGGATATTAGGTCTCCGACGATGCCAGTGGCGGAGTTAGAGAGGCACCGTGGGAGTGTGAGTGCAATTGCTTGGGCTCCGCAGAGTTCTAGGCACATTTGTTCTGCTGGGGATGATGCTCAGGCTCTGATTTGGGAATTGCCTACTGTGGCTGGACCTAATGGGATTGATCCAATGTCTGTGTATTCTGCTGCTTCTGAGATTAATCAGTTGCAGTGGTCCGTGGCCCAGCCCGATTGGATCGCCATTGCTTTTGCCAACAAGATGCAGCTTTTGAGGGTTTGA 1032 0.5417 MDNSSQESQLRSDNSATYDSTYPLYAMALSSSSTSSNHQRIAVGSFIEEYTNRVDILSFNPETLTLRPNPSLSFDHPYPPTKLMFHPSTPSSLLRHSAVDLLATSGDYLRLWEVRESSVEALSLFNNSKTSEFCAPLTSFDWNDIDPKRIGTSSIDTTCTIWDIEKGVVETQLIAHDKEVYDIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSPTMPVAELERHRGSVSAIAWAPQSSRHICSAGDDAQALIWELPTVAGPNGIDPMSVYSAASEINQLQWSVAQPDWIAIAFANKMQLLRV 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g01990 343 ProSiteProfiles Trp-Asp (WD) repeats profile. 173 213 IPR001680 GO:0005515
Arst10g01990 343 SMART WD40_4 124 163 IPR001680 GO:0005515
Arst10g01990 343 SMART WD40_4 166 204 IPR001680 GO:0005515
Arst10g01990 343 SMART WD40_4 67 113 IPR001680 GO:0005515
Arst10g01990 343 SMART WD40_4 255 295 IPR001680 GO:0005515
Arst10g01990 343 Coils Coil 342 343 - -
Arst10g01990 343 Pfam WD domain, G-beta repeat 173 204 IPR001680 GO:0005515
Arst10g01990 343 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 262 296 - -
Arst10g01990 343 Gene3D - 3 342 IPR015943 GO:0005515
Arst10g01990 343 SUPERFAMILY WD40 repeat-like 31 299 IPR036322 GO:0005515
Arst10g01990 343 FunFam WD repeat-containing protein LWD1 11 342 - -
Arst10g01990 343 PANTHER WD REPEAT CONTAINING PROTEIN 5 343 IPR045159 -
Arst10g01990 343 ProSitePatterns Trp-Asp (WD) repeats signature. 282 296 IPR019775 -
Arst10g01990 343 ProSiteProfiles Trp-Asp (WD) repeats profile. 262 296 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g01990 Arst-Chr10 66157113 66158742 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g01990 K11805 - tcc:18605867 583.948
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst10g01990 10 66157113 66158742 Arst10g01990 10 66157113 66158742 ECH