Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g01987 ATGGCCGCCCCACCTTTATACTTCCACGCTACCCTGCGTACTTCCCCGTCCCCTTCTTCTGGCCGTTCTTCTACCCTCTCTCTACTTTCCAGACCTCACTTCAACAGTTCCTCAACAAAGCTCAAAACTTTCTTCCCTCTCAAGCATGCTGCAAATGCCACCTCTACCACCCGCGGCGGTTCCCTCTCCGTTCGCATGACTTGGGATGGACCACTATCTTCCGTCAAATTGATCATCCAGGGCAAAAATCTAGAGCTCACTGATGCGGTGAAGCAGCACGTGGAGGAGAAGTTGGGGAAGGCCGTTCAGAAGCACAGTCACTTAGTTAGGGAAGTTGATGTTAGGCTATCCATTCGAGGAGGAGGAGAATTTGGGAGAGGACCCAGGACTCGTAGATGTGAGGTAACTATTTTTACAAAGAGGCACGGAGTGGTGAGGGCTGAGGAAGATGCAGAAAGTACATATGGAAGTATAGATTTGGTGTCCTCAATCATCCAACGGAAGCTGAGGAAGATAAAGGAAAAGGAGTCGGACCATGGTCGGCACATGAAGGGCTTCAACAGGTTGAAGGTTAGAGAGCCTGTGGAGCCGGTACCACTGGATGAAGAAGAGATATCTGCAGAAGAGGAGGAAGAAACAATTGATGAGGTTGTCCGCACAAAATACTTTGACATGCCTCCATTGACTGTGGCAGAAGCAATTGAACAACTCGAAAATGTTGATCATGACTTCTATGCTTTCCGAAATGAAGAAACTGGGGAGATTAATATTGTATACAAAAGAAAAGAAGGAGGTTATGGAGTCATTATTCCCAAAGGAGATGGTGAAGCACAGAAATTGGAGCCTTTAGTGATTGAACAAGCTAGAGAACACTCCCTGAAAGAATGA 888 0.4707 MAAPPLYFHATLRTSPSPSSGRSSTLSLLSRPHFNSSSTKLKTFFPLKHAANATSTTRGGSLSVRMTWDGPLSSVKLIIQGKNLELTDAVKQHVEEKLGKAVQKHSHLVREVDVRLSIRGGGEFGRGPRTRRCEVTIFTKRHGVVRAEEDAESTYGSIDLVSSIIQRKLRKIKEKESDHGRHMKGFNRLKVREPVEPVPLDEEEISAEEEEETIDEVVRTKYFDMPPLTVAEAIEQLENVDHDFYAFRNEETGEINIVYKRKEGGYGVIIPKGDGEAQKLEPLVIEQAREHSLKE 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g01987 295 Hamap Ribosome hibernation promoting factor [hpf]. 75 272 IPR034694 -
Arst10g01987 295 FunFam ribosome-binding factor PSRP1, chloroplastic 227 278 - -
Arst10g01987 295 PANTHER 30S RIBOSOMAL PROTEIN 61 281 - -
Arst10g01987 295 Coils Coil 200 220 - -
Arst10g01987 295 SUPERFAMILY Ribosome binding protein Y (YfiA homologue) 76 182 IPR036567 -
Arst10g01987 295 Pfam Sigma 54 modulation/S30EA ribosomal protein C terminus 215 268 IPR032528 -
Arst10g01987 295 FunFam Ribosome-binding factor PSRP1, chloroplastic 77 180 - -
Arst10g01987 295 Pfam Sigma 54 modulation protein / S30EA ribosomal protein 78 175 IPR003489 GO:0044238
Arst10g01987 295 CDD RaiA 76 175 IPR003489 GO:0044238
Arst10g01987 295 Gene3D - 76 187 IPR036567 -
Arst10g01987 295 Gene3D - 227 277 IPR038416 -
Arst10g01987 295 NCBIfam ribosome-associated translation inhibitor RaiA 76 180 IPR003489 GO:0044238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g01987 - - gmx:100803327 418.698
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst10g01987 10 65967401 65969617 Arst10g01987 10 65967401 65969617 ECH