Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g01405 ATGGTTAAGAAAAAGGAGATGAAAAAGGAGATCTACAAGTACAAGGTGTTGAATTTCTTGACCAGAAAATTTGAATTGAAAAAGCAAGAACCATCTTTGGACATTAAGGAAGCATTTCACATGTTTGCAAAAGGTGGAGAATACATGTCAAATGATCAGCTTCTAGGGTTCATGTTGGAGCATCAAGGTGATAAGAACTGCACCTTAATGGATTTGGAGGTGGTTTTGTTGCAAATTGCTGGGAATTCCAACACTACGAGTAGGGAACAAGGGCTCAGCCTCATGGAGTTCATCAATTTTCTGCTTCTTGATGATTTCAATGGTCCATTGAAAACTGAGGTTCACCATGATATGAGGGCTCCCTTGTCACATTACTTTATGTACACTGGACACAATTCCTATCTGACTGGGAATCAACTCACAAGTGATTGCAGTGACAAGCCGATTATTGAGGCTTTGCAACAAGGAGTTCGAGTGATTGAACTCGATCTGTGGCCATCTTCCAATGAAGATGGTATTAAAGTAGTTCACGGAAGGACTCTTACCACTCCAGTTTTACTAACCAAATGTCTGGAATCCATAAAGAAATATGCTTTTGTCAAATCTGATTTTCCAGTGATACTAACTTTGGAAGACCACTTAACATCAAAACTTCAGGCCAAATTCACAGAAAAAGCAACTCAAATATTTGGAGACATGCTTTATTATCCCAAGACAGATTACTTGACAGAATTCCCTTCACCAGAATCATTGAAAAATCTAGTTGTTATATCCACCAAACCTCCTAAAGAATATGCTCATTCTAATAGTGTTATGGACAAGGGCAGCAATAATAACCATATGCAAAATGAAAGCGAACTGTCCTCCGGAGAAGAAGAAGAATTATGGAACGTGGAATTGCCAGATTCCATGGCTCAATTGACAACTGAGGAGAATCAGAATGTAAGTGATGAAGACACAAATATATGTGATTTCAAACCAAGCCAGCAAAATGCACCTGAATACAAACACTTGATTGCAATCCATGGTGGGAAATCAAAAGGTTCTGTGAAGGATCGACTGAAAGCCGATAGCGAAGTAGTTAAACGGCTAAGTTTGAGTGAGAAGAAACTCAAAAGTGCTTCTGAATCTCATGGAAAAGACATTATTAGGTTCACACAGAAAAATATACTGAGAGTCTATCCTAAAGGAGAACGCATCAAATCCACAAATTTTCGGCCGCATTTAGGGTGGATGTATGGAGCTCAAATGGTGGCATTCAATATGCAGGGGCATGGCAAATCGCTATGGTTGATGCAAGGAATGTTTAGAGCAAATGGAGGATGTGGTTATCTTAGAAAGCCCGAATTTCTGACCCGAACAAATTCACATGAAGACGAGTTTGATCCTAGAAGAACATTGCCAGTGAAGCAGACATTAAGGGTAAATGTTTACCTAGGTGTTGGGTGGAGATCCGATTTCGGTGCAACACACTTTGATCTATTTTCTCCTCCAGATTTTTACACCAAGGTATGTCTTGTTGGGGTGCCAACTGATTGTGTAAAGAAAAGAACAAGGGTAATCAAGGACAATTGGCTTCCTGTTTGGGATGAAGAGTTTGAATTTCCTTTAACAGTTCCTGAGCTTGCTTTGCTGCGGATCGAAGTAAAGGATAAAGACAAGGGGAAGGATGACTTTGCAGGGCAGACTTGTTTGCCAGTATCCGAACTGCGACTCGGATTCCGGTCAGTCGCCCTGCATGACAGGAAGGGAAAGAAATTTAAATCTGTGAAGCTTCTAATGAGGTTTCAGCTTGAAATATTTTGA 1806 0.4014 MVKKKEMKKEIYKYKVLNFLTRKFELKKQEPSLDIKEAFHMFAKGGEYMSNDQLLGFMLEHQGDKNCTLMDLEVVLLQIAGNSNTTSREQGLSLMEFINFLLLDDFNGPLKTEVHHDMRAPLSHYFMYTGHNSYLTGNQLTSDCSDKPIIEALQQGVRVIELDLWPSSNEDGIKVVHGRTLTTPVLLTKCLESIKKYAFVKSDFPVILTLEDHLTSKLQAKFTEKATQIFGDMLYYPKTDYLTEFPSPESLKNLVVISTKPPKEYAHSNSVMDKGSNNNHMQNESELSSGEEEELWNVELPDSMAQLTTEENQNVSDEDTNICDFKPSQQNAPEYKHLIAIHGGKSKGSVKDRLKADSEVVKRLSLSEKKLKSASESHGKDIIRFTQKNILRVYPKGERIKSTNFRPHLGWMYGAQMVAFNMQGHGKSLWLMQGMFRANGGCGYLRKPEFLTRTNSHEDEFDPRRTLPVKQTLRVNVYLGVGWRSDFGATHFDLFSPPDFYTKVCLVGVPTDCVKKRTRVIKDNWLPVWDEEFEFPLTVPELALLRIEVKDKDKGKDDFAGQTCLPVSELRLGFRSVALHDRKGKKFKSVKLLMRFQLEIF 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g01405 601 Gene3D C2 domain 467 601 IPR035892 -
Arst10g01405 601 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 472 597 IPR035892 -
Arst10g01405 601 Gene3D - 27 108 - -
Arst10g01405 601 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 116 260 - -
Arst10g01405 601 SMART C2_3c 472 579 IPR000008 -
Arst10g01405 601 SUPERFAMILY PLC-like phosphodiesterases 116 453 IPR017946 GO:0006629|GO:0008081
Arst10g01405 601 PANTHER PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN 13 598 IPR001192 GO:0035556
Arst10g01405 601 Pfam Phosphatidylinositol-specific phospholipase C, Y domain 358 450 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Arst10g01405 601 Gene3D Phosphatidylinositol (PI) phosphodiesterase 113 464 IPR017946 GO:0006629|GO:0008081
Arst10g01405 601 Pfam Phosphatidylinositol-specific phospholipase C, X domain 118 260 IPR000909 -
Arst10g01405 601 PRINTS Phospholipase C signature 390 411 IPR001192 GO:0035556
Arst10g01405 601 PRINTS Phospholipase C signature 411 429 IPR001192 GO:0035556
Arst10g01405 601 PRINTS Phospholipase C signature 121 139 IPR001192 GO:0035556
Arst10g01405 601 PRINTS Phospholipase C signature 244 261 IPR001192 GO:0035556
Arst10g01405 601 PRINTS Phospholipase C signature 565 575 IPR001192 GO:0035556
Arst10g01405 601 PRINTS Phospholipase C signature 147 167 IPR001192 GO:0035556
Arst10g01405 601 SMART plcy_3 335 452 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Arst10g01405 601 ProSiteProfiles C2 domain profile. 453 581 IPR000008 -
Arst10g01405 601 FunFam Phosphoinositide phospholipase C 467 599 - -
Arst10g01405 601 ProSiteProfiles Phosphatidylinositol-specific phospholipase Y-box domain profile. 365 451 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Arst10g01405 601 SMART plcx_3 116 260 IPR000909 -
Arst10g01405 601 SUPERFAMILY EF-hand 31 118 IPR011992 -
Arst10g01405 601 Pfam C2 domain 472 571 IPR000008 -
Arst10g01405 601 CDD C2_PLC_like 470 599 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g01405 Arst-Chr10 23042973 23047053 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g01405 12 599 Acyl Lipid Metabolism Gene Families AT2G40116 53.707 0.0 664
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g01405 K05857 - gmx:100803435 793.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst10g01405 10 23042973 23047053 Arst10g01405 10 23042973 23047053 ECH
Arst10g01405 10 23042973 23047053 Arst7g01139 7 9861599 9864934 PCT