Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g01403 ATGGCCACCCACACATACACCTACAAGCAATTCAGCTGCTTCAACAAGACCTTCACCAACACCGAGCCCGGACCTCCCTCTGACGTCCTCCACGCCTTCCACTCCTTCTCCTCCGCCGGCGCCACTTCCATGTCCGCCGACAACCTCCTCGGCTTTCTCACCGATCACCAGCGCGAACCTCAATGCACCTCCGACGACTCCCTTCGCATCATTCAATCGCTCAAAGGAGATCACAAAACCGACGACGGACTCACCCTCGACGACTTCTTCCACTTCCTCCTACGCGACGATCTCAATGCTCCCATCAAATCGGAGGTACATCATGATATGAATGCTCCATTGTCACATTATTTCATATTTACCGGGCACAATTCCTATCTGATTGGGAACCAACTAACCAGTGATTGCAGTGATGTGCCAATCATAGATGCTTTGGTACGAGGTGTGCGAGTGATTGAACTTGATTTATGGCCGAATTCAACTAAAGATGATGTTGAGGTTTTTCATGGAAGAACTCTTACCACTCCCGTCTCACTAAGGCAATGTTTGTGGTCCATAAGAGAGCATGCGTTTGTTACATCTAAGTATCCTGTCATTATAACTTTTGAAGACCACCTTACTCCTGATCTTCAGGCTGTAGTTGCAGAGATGGTGACTGAAATATTTGGAGAACTGCTTTATTATCCTGAGACAGATTTGCTGTCTGAATTCCCCTCCCCAGAATCGTTGAAAGGTCGAATTCTCATATCAACTAAACCACCAATAGAATATCTTGATTCCAAATCCTGTGACGAGGAAGATAAAAAACCAAAATCAACTGACAAAGGATCACAATCACCAGATGTTACTAATAAAGTGGAAACTGATGACAAAGATGTGGAAGATTTGAATGAAAGTGATGAAAAATCATACAAGGAGAGTGCACCTAAGTATAAACGTCTGATTACAATTCATGCTGGCAAATCAAAGGGTGATTTTCAGGAAGACTTGAAGGTTGCTGGTAAAGTTAAGCGTTTGAGCTTGAGTGAAAGTAAACTTGAAAAGGCTTCTGAATCTTTTGCACCTGACATTGTAAGGTTCACCCAGAAGAATATTCTGAGAGTGTATCCAAAGGGAACACGCATAACTTCCTCAAATTACAAGCCACACATAGCATGGACGCATGGAGCTCAGATGGTTGCATTTAACATGCAGGGGCATGGCAAATCACTTTGGTTCATGCAAGGGATGTTCAAAGCAAATGGAGGGTGTGGCTATGTGAAAAAACCTGATTTTCTTGTCGAAAAAGGTCCGAATAACGAGGTTTTCGATCCTAAAAGAACATTGCCGGTGAACAAGACATTAAAGGTAAAAGTCTACTTGGGGACAGGTTGGAGCTCAGATTTCAGCCTAACGGACTTCGATTCCCATTCACCACCAGACTTCTATGTGAAGATTGATATTGCTGGAGTACCTGCTGATAGAGCGAAGAAGAAAACAAAGACAATTAAAAATAACTGGTTTCCCGTGTGGGAAGAAGAGTTTGAATTCCCATTAAGTGTCCCAGATCTGGCTTTGCTACGTATACAAGTTAAAGAAGAAAATAGAACTGAGAAGGATGATTTTGCTGGCCAGACATGTTTGCCAGTCACAGAGCTCAAGTCTGGATTTCGTTCAGTCCCTCTCTATGATGAAAAGGGCGAGAAATATAAATCTGTCAAGCTTTTAATGCGGTTTCAATTCAAATGA 1728 0.4323 MATHTYTYKQFSCFNKTFTNTEPGPPSDVLHAFHSFSSAGATSMSADNLLGFLTDHQREPQCTSDDSLRIIQSLKGDHKTDDGLTLDDFFHFLLRDDLNAPIKSEVHHDMNAPLSHYFIFTGHNSYLIGNQLTSDCSDVPIIDALVRGVRVIELDLWPNSTKDDVEVFHGRTLTTPVSLRQCLWSIREHAFVTSKYPVIITFEDHLTPDLQAVVAEMVTEIFGELLYYPETDLLSEFPSPESLKGRILISTKPPIEYLDSKSCDEEDKKPKSTDKGSQSPDVTNKVETDDKDVEDLNESDEKSYKESAPKYKRLITIHAGKSKGDFQEDLKVAGKVKRLSLSESKLEKASESFAPDIVRFTQKNILRVYPKGTRITSSNYKPHIAWTHGAQMVAFNMQGHGKSLWFMQGMFKANGGCGYVKKPDFLVEKGPNNEVFDPKRTLPVNKTLKVKVYLGTGWSSDFSLTDFDSHSPPDFYVKIDIAGVPADRAKKKTKTIKNNWFPVWEEEFEFPLSVPDLALLRIQVKEENRTEKDDFAGQTCLPVTELKSGFRSVPLYDEKGEKYKSVKLLMRFQFK 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g01403 575 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 108 252 - -
Arst10g01403 575 SMART plcx_3 108 252 IPR000909 -
Arst10g01403 575 Pfam Phosphatidylinositol-specific phospholipase C, Y domain 337 425 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Arst10g01403 575 PRINTS Phospholipase C signature 386 404 IPR001192 GO:0035556
Arst10g01403 575 PRINTS Phospholipase C signature 365 386 IPR001192 GO:0035556
Arst10g01403 575 PRINTS Phospholipase C signature 113 131 IPR001192 GO:0035556
Arst10g01403 575 PRINTS Phospholipase C signature 541 551 IPR001192 GO:0035556
Arst10g01403 575 PRINTS Phospholipase C signature 139 159 IPR001192 GO:0035556
Arst10g01403 575 PRINTS Phospholipase C signature 236 253 IPR001192 GO:0035556
Arst10g01403 575 MobiDBLite consensus disorder prediction 258 275 - -
Arst10g01403 575 Pfam Phosphoinositide-specific phospholipase C, efhand-like 28 98 IPR015359 -
Arst10g01403 575 ProSiteProfiles Phosphatidylinositol-specific phospholipase Y-box domain profile. 340 426 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Arst10g01403 575 MobiDBLite consensus disorder prediction 284 305 - -
Arst10g01403 575 FunFam Phosphoinositide phospholipase C 105 440 - -
Arst10g01403 575 Gene3D C2 domain 442 575 IPR035892 -
Arst10g01403 575 PANTHER PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN 10 574 IPR001192 GO:0035556
Arst10g01403 575 Pfam C2 domain 448 549 IPR000008 -
Arst10g01403 575 CDD C2_PLC_like 446 575 - -
Arst10g01403 575 Gene3D Phosphatidylinositol (PI) phosphodiesterase 105 440 IPR017946 GO:0006629|GO:0008081
Arst10g01403 575 Pfam Phosphatidylinositol-specific phospholipase C, X domain 110 252 IPR000909 -
Arst10g01403 575 CDD PI-PLCc_plant 107 414 - -
Arst10g01403 575 ProSiteProfiles C2 domain profile. 428 557 IPR000008 -
Arst10g01403 575 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 447 574 IPR035892 -
Arst10g01403 575 MobiDBLite consensus disorder prediction 258 305 - -
Arst10g01403 575 SUPERFAMILY EF-hand 7 110 IPR011992 -
Arst10g01403 575 SMART C2_3c 447 555 IPR000008 -
Arst10g01403 575 SMART plcy_3 311 427 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Arst10g01403 575 Gene3D - 25 104 - -
Arst10g01403 575 FunFam Phosphoinositide phospholipase C 442 575 - -
Arst10g01403 575 SUPERFAMILY PLC-like phosphodiesterases 108 428 IPR017946 GO:0006629|GO:0008081
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g01403 Arst-Chr10 23025623 23031853 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g01403 5 575 Acyl Lipid Metabolism Gene Families AT2G40116 58.833 0.0 700
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g01403 K05857 - gmx:100799027 807.749
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst10g01403 10 23025623 23031853 Arst7g01136 7 9832230 9838566 ECH
Arst10g01403 10 23025623 23031853 Arst10g01403 10 23025623 23031853 ECH
Arst10g01403 10 23025623 23031853 Arst7g01136 7 9832230 9838566 PCT