Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g01392 ATGCCAACCCCGGTGGCAGCAGCCCGGCAATGCCTAACACCAGAGGCTGCCCGCGCCCTCGACGAGGCGGTGTCCGTTGCCCGCCGTCGCGGCCACGCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCGCCTTCAGTTCAAGGCCCTCGACCTCTGCCTCTCCGTGTCCCTCGACCGCTCCCCTTCCTCCAACCCATCCACTGACCCGCCCGTCTCTAACTCCCTCATGGCAGCCATCAAGCGGTCTCAGGCCAACCAGCGCCGACACCCTGACACGTTCCATAACCAACTCTTGTTCCAAAGTAACCACTCTAACAACCTCCAACAAACTCAGCAACCGTTTTCTGTTTCGTCGGTTAAAGTTGAGCTGCAGCATTTGGTGATATCGATTCTTGATGACCCGGTTGTCAGTCGGGTTTTCGCAGAAGCGGGTTTCCGGAGCCCCGAAATTAAGCTCGCGATACTCAGGCCCTTGCCCCAGCTTTTTCGCTACTCGAGATCGCGTGGGCCGCCGGTTTTTCTATGTAACTTGCCGGAACAAGGCCGCCGGGGAGGGTTTTTCGGGTTCCCGTTTTCCGGCGGCGGAGACGGAGGGGAGGATGAGAGTTTCAGGAGGATTGGGGAGGTTCTGGTGAGAAGCAAGGGGAGGAACCCGGTGCTGCTTGGCGCGTGTGCTGGCGAGGCGATGCGGCAGTTCGTGGAGGCGGTGGAGAAGCGGAGGGAGGGGGTGCTGCCGGTGGAGCTGGTAGGGTTGAGGATTGTATCCGGGATTAGGGAAGCGGAGGAGGTGGCGGAGAAGGGCGTGGGGCCAGGAGTGGTGGTGAATTTGGGGGACTTGAAGGGTTTTGTGGCGGAGGAGGAGAATAGCGGCGGTGAAGAGGGTGTTCTTGGGGAACTGGGGCGGTTGTTGAAGGTTCATAGTGAGAGGGTATGGTTGATTGGTTTTGCTCGGAGCTATGAGTCTTACTTAAAGTTTGTTGGAAGGTTTCCTTTTGTCGAGAAAGATTGGGATTTGCAGCTTCTTCCAATTACTTCTCTTCAATCTTGCCAGAAACCAAGGTCCAGTTTAATGGATTCATTTGTACCATTTGGTGGATTTTTCTCTTCCCCTTCTGATTTGAAAAGTCCACTACCTGGCTGTACTCCCAATCTCAGGCACCGTCAAAACAGCGAAAGGTGTGAACAAGAAGTGCCTGCTCCAAAGGAAAGATTTTCTTCTTTAGCTGTTGAACCATGTCAATCTAACTATCAGCCATGGCTACAGATTGCAGAAATTAATGCAGCAAAAGGATTGAATGCTAAGACCAAAAAAGATGATTTTCTTTTATTGGATGGTGGTAAATCCTTGCGAACTCATAAGAACATGGATAATGTTTACTATCATCTGCGCCAGGGATTTTCCGAAGCAAATTCTTGTCCGAATGTTATGGGTTTTCTTTGTACTAAAGATAAAAAGAAAGATGCTGAAAATCGCGACAACAAAGTTACAGACAATTCTCCCGTTGAAGTCATCGATCTAAACTCGGAAGTTCCAGTCAATGTGCAAATTATGTCTACATCACAACCAACCAGTCCTTTTTCTTTGGCTTTCAAGGAAATGCAGGGGAAGCATACTTCGAAACTTGTGGAGATGTTCCAAAAAGCTGAAGATCTCGAGTTAGCTGACCTGAGATCATGCAACATCTCCAATTCAAGTGTGTGCGATGGTAGTGAAATGTCTCCAACTTCAGTTAATTCTGTAACCACAGATCTGGGTCTAGGAATATGTCCTTCTCCTACCAGCAATAAATTTAAGAAACCTACTGACGAATATTCAATGGATCCTCCAAAGCAAATCGGGAGTCAATTTTCTTCGAACTTCAATTTGGCTGATGGGAATATCTTGAAGCATCTGTCACAGTCTTCTTCCTGCTTAAGTTTCGACCATGTTAGACAAGTTGATGCGAGAAATCCCAAAAGCCTTTTTGAAGCTCTATCGAAGGAGGTAACCTGGCAAGATGAAGCATTACATGCTATCGTCAAAGCAATAGTTTGCAGTCCAATAAAAAGGATTAGACCATGTGGAGCAATTCAACGAGGCGACTTATGGATGAATTTTGTGGGACCTGATAGGCACGGCAAAAAGAAAGTAGCCGTTGCTTTAGCTGAGATTTTGTATGGAAGTCGGGACAGCTTTATTTGTATGGATCTAGGTTCCAAAGAAATGAAAGCATCCAACGCTGTGAAATTTAGGGGAAAGACTACTCTTGATTTTATTGTGGGGGAGTTTTGCAAGAAAACTTTGTCTGTGGTTTTTCTTGAAAACGTAGATAAGGCAGATGCAGTAACTCAAAGCAGTTTGTTGCAAGCCATCAAGACGGGAAAAATAACAGACTCGCACGGTCGAGAAATCGGATTAAACAATGCCACATTTGTGACTTCGTTTTTAAATTACAAAGATAGTTTGACGTTAACAGAAGAACCTTCCAACTATCCTGAGGAAAGGATACTAATGGCAAAAAGAGGAGCTATCAAGATCAAAGTTGAGCATGCCATTGGAGACATCATATCTAACAGTCTGAGAGATGCTATGCCAGATCTAGTTTTTGTAAATAAACGAAAATTGATCGGTGATAATGAATTTCACCACGACCGGCATTTAATCTCAGATATGCCTAAAAGGGCACATATAGCATCAAATTGGCTTTTGGATTTGAATCTTCCAGCTGAAGAGAGTGAATCACAACAAATGGACAGTGAAAATTCCAAACATGTCTCAACTGGGAACCAAAACATTTGGTTGCAAGATTTGTGTGATCAAGCTTACCAAACGGTTGTTTTCAAACCTTTCAATTTTGATGCGCTGGAAGATAGAGTGTTAGAAGTGATTAGAAGTAACTTCAACAAGATTCTTGGATCAGAATGTGTCTTACAAATTCAGTCAGAAGTCATTGACCAGTTGCTCGCAGCAGCATATGTCTTGGACCAGGATACAGTGGTGAAGTGGGTGGAGCAAGTTCTGAGCGAAGGATTCATCGAAGTACAGAGAAGGTGCAACCCCACAGCTAGTTCAATTGTGAAACTTGCTTCATATCAAGATCAAGCTTTAAGTGTATACCTTCCACCAAGAATACTTTTGGATTGA 3207 0.4425 MPTPVAAARQCLTPEAARALDEAVSVARRRGHAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLQFKALDLCLSVSLDRSPSSNPSTDPPVSNSLMAAIKRSQANQRRHPDTFHNQLLFQSNHSNNLQQTQQPFSVSSVKVELQHLVISILDDPVVSRVFAEAGFRSPEIKLAILRPLPQLFRYSRSRGPPVFLCNLPEQGRRGGFFGFPFSGGGDGGEDESFRRIGEVLVRSKGRNPVLLGACAGEAMRQFVEAVEKRREGVLPVELVGLRIVSGIREAEEVAEKGVGPGVVVNLGDLKGFVAEEENSGGEEGVLGELGRLLKVHSERVWLIGFARSYESYLKFVGRFPFVEKDWDLQLLPITSLQSCQKPRSSLMDSFVPFGGFFSSPSDLKSPLPGCTPNLRHRQNSERCEQEVPAPKERFSSLAVEPCQSNYQPWLQIAEINAAKGLNAKTKKDDFLLLDGGKSLRTHKNMDNVYYHLRQGFSEANSCPNVMGFLCTKDKKKDAENRDNKVTDNSPVEVIDLNSEVPVNVQIMSTSQPTSPFSLAFKEMQGKHTSKLVEMFQKAEDLELADLRSCNISNSSVCDGSEMSPTSVNSVTTDLGLGICPSPTSNKFKKPTDEYSMDPPKQIGSQFSSNFNLADGNILKHLSQSSSCLSFDHVRQVDARNPKSLFEALSKEVTWQDEALHAIVKAIVCSPIKRIRPCGAIQRGDLWMNFVGPDRHGKKKVAVALAEILYGSRDSFICMDLGSKEMKASNAVKFRGKTTLDFIVGEFCKKTLSVVFLENVDKADAVTQSSLLQAIKTGKITDSHGREIGLNNATFVTSFLNYKDSLTLTEEPSNYPEERILMAKRGAIKIKVEHAIGDIISNSLRDAMPDLVFVNKRKLIGDNEFHHDRHLISDMPKRAHIASNWLLDLNLPAEESESQQMDSENSKHVSTGNQNIWLQDLCDQAYQTVVFKPFNFDALEDRVLEVIRSNFNKILGSECVLQIQSEVIDQLLAAAYVLDQDTVVKWVEQVLSEGFIEVQRRCNPTASSIVKLASYQDQALSVYLPPRILLD 1068
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g01392 1068 ProSiteProfiles Clp repeat (R) domain profile. 8 188 IPR004176 -
Arst10g01392 1068 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 675 834 IPR027417 -
Arst10g01392 1068 PANTHER CHAPERONE PROTEIN CLPD, CHLOROPLASTIC 1 1048 - -
Arst10g01392 1068 Gene3D - 67 184 IPR036628 -
Arst10g01392 1068 Gene3D - 651 889 IPR027417 -
Arst10g01392 1068 Coils Coil 71 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g01392 Arst-Chr10 22351705 22355924 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g01392 - - gmx:100786125 1226.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst10g01392 10 22351705 22355924 Arst10g01392 10 22351705 22355924 ECH
Arst1g00573 1 5538042 5546536 Arst10g01392 10 22351705 22355924 ECH
Arst7g01907 7 29872860 29877916 Arst10g01392 10 22351705 22355924 ECH
Arst10g01392 10 22351705 22355924 Arst1g00573 1 5538042 5546536 ECH
Arst10g01392 10 22351705 22355924 Arst7g01907 7 29872860 29877916 ECH