Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g01351 ATGGAAACCACCAAACAGCCAAACCCTAACAACCACCCCTCCCCCAATGCCGACCCCGAACAACAACAAAGCCACTTCACCGACGGAGACGACGACGAAGAAGAATTTGAAGAAGAAGAAGAGGAAGAAGACGGAGACGACGTCGTTTCGCGTGACTCCCAGTCCCCAGTGTCGCAGCTTCGCGAGCAGCGCTTCAAGATGGAGACGCTCTCGCGGCGGCTGTCATCGGAGCTTGTACCAATCAGAGTCCACGACATTGTGATCCGTGGCAACGCGAAGACGAAGGATTGGGTGATCCAAGCGGAGCTCGAGGGGATCGAGAACGCCGCCACCGTGCAGGACCTGATTCGCGCCTCGCAGGTCGCACTTGCAAGGCTCCAGGGACTCGGAATCTTCGATTCCACCAACCTCCGCCTTGAGCCTGGGCCGCCGGAGCTCCCTCACACAGCCAACATCGTCATTGATGTCGTCGAAGCCGCTAGCAAAGTCAGTGGAGAATTCGGCGTTTACACCAAACCCTCGACTAGTTCCTGGACTAGTGAAGGTACTCTTAAGTACAAAAACTTGTTAGGTTATGGTGATCTATGGGATGCTTCTGTGGCCTACGGTGCTAACCAAACAACGGAGGTGAGTATCGGGGTCTATGCCCCTAGACTTAAAGGATTGTTAACTCCTCTTGTAGCACGACTATCCTTGCTTTCCCAAGATTGGCAAGAGTTTTCTTCATACAAAGAGCAATTGTTGGGCATGTCTCTTGGCTTAATATCAACACGGCACCATGACTTAGTGTACACTCTTGGATGGCGTACCTTAACAGATCCGTCACAAATGTCATCCAGGTCTATAAGGAGACAACTTGGCCATGGTTTGCTGTCATCTCTGAAGTATACATTTAAATTTGACAGGAGAAATTCACCAATCAGGCCTACCAGAGGATATGCTTTTCTTTCTACCACTCACTTTGGTGGCCTCATACCAGATGAACGAAGCTTGCGGTATATTCGTCAGGAGTTCGATGTTCGTTGCGCAGTCCCCTTTGGGTTTTATAATACAGCACTGAATCTTGGCATTTCTGCCGGTGCTGTTTTTCCATGGGGCCCTGGTTTCTTGAACAAGCCATCTCCCCTTCCTGAAAGGTTTTATTTGGGTGGTGATTTCTCTCCAGTTTGCACCCTTGGAGGGCCAGTAACATTGTGGGGATTCAAAACTCGGGGATTAGGTCCTACTGAACCAAGAAGGCAAAGCAGAGATGGAGTCAGCAATGACAATGATGATTCATCTAGATGGGACTTTGTTGGAGGGGATCTTGCTGTTAGTGCTTTTGCAGACCTATCTTTTGATCTTCCAATCAAGTGGTTGAGAGAACACGGAATCCATGGTCATGTGTTTGCTGGTGCTGGGAATATTACAAAATTAACTCAGAACGAATATAAGCTGTTCTCTCCTCGCAAGTTCTTAGAATCCTTTCGGACATCAGTGGGCTGTGGATTTGTTATTCCTACTAGACTTTTCCGCTTAGAGGGTAACTTCTACCATATTCTCCGGCAGGATGAGCATGATCGTGGAAAAACTGGATTTAGATTCAGTTTTTCGTCTCCTTCGTAG 1605 0.4866 METTKQPNPNNHPSPNADPEQQQSHFTDGDDDEEEFEEEEEEEDGDDVVSRDSQSPVSQLREQRFKMETLSRRLSSELVPIRVHDIVIRGNAKTKDWVIQAELEGIENAATVQDLIRASQVALARLQGLGIFDSTNLRLEPGPPELPHTANIVIDVVEAASKVSGEFGVYTKPSTSSWTSEGTLKYKNLLGYGDLWDASVAYGANQTTEVSIGVYAPRLKGLLTPLVARLSLLSQDWQEFSSYKEQLLGMSLGLISTRHHDLVYTLGWRTLTDPSQMSSRSIRRQLGHGLLSSLKYTFKFDRRNSPIRPTRGYAFLSTTHFGGLIPDERSLRYIRQEFDVRCAVPFGFYNTALNLGISAGAVFPWGPGFLNKPSPLPERFYLGGDFSPVCTLGGPVTLWGFKTRGLGPTEPRRQSRDGVSNDNDDSSRWDFVGGDLAVSAFADLSFDLPIKWLREHGIHGHVFAGAGNITKLTQNEYKLFSPRKFLESFRTSVGCGFVIPTRLFRLEGNFYHILRQDEHDRGKTGFRFSFSSPS 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g01351 534 PANTHER SORTING AND ASSEMBLY MACHINERY SAMM50 PROTEIN FAMILY MEMBER 30 531 IPR039910 -
Arst10g01351 534 Pfam Surface antigen variable number repeat 81 158 IPR010827 GO:0019867
Arst10g01351 534 MobiDBLite consensus disorder prediction 27 48 - -
Arst10g01351 534 Pfam Omp85 superfamily domain 188 531 IPR000184 GO:0019867
Arst10g01351 534 Gene3D membrane protein fhac 80 159 - -
Arst10g01351 534 MobiDBLite consensus disorder prediction 1 61 - -
Arst10g01351 534 FunFam Outer membrane OMP85 family protein 80 159 - -
Arst10g01351 534 MobiDBLite consensus disorder prediction 1 23 - -
Arst10g01351 534 Gene3D membrane protein fhac: a member of the omp85/tpsb transporter family 171 532 - -
Arst10g01351 534 FunFam Outer membrane OMP85 family protein 170 532 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g01351 Arst-Chr10 20058926 20065346 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g01351 K07277 - gmx:100785408 883.248
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst10g01351 10 20058926 20065346 Arst10g01351 10 20058926 20065346 ECH
Arst10g01351 10 20058926 20065346 Arst7g01095 7 8981379 8985321 PCT